KEGG   Aquarana catesbeiana (American bullfrog): 141140204
Entry
141140204         CDS       T11018                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
acat  Aquarana catesbeiana (American bullfrog)
Pathway
acat03082  ATP-dependent chromatin remodeling
acat03083  Polycomb repressive complex
acat04110  Cell cycle
acat04330  Notch signaling pathway
acat04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:acat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    141140204 (HDAC2)
   03083 Polycomb repressive complex
    141140204 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    141140204 (HDAC2)
   04350 TGF-beta signaling pathway
    141140204 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    141140204 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:acat03036]
    141140204 (HDAC2)
Enzymes [BR:acat01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     141140204 (HDAC2)
Chromosome and associated proteins [BR:acat03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     141140204 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     141140204 (HDAC2)
    BRAF-HDAC complex
     141140204 (HDAC2)
    REST complex
     141140204 (HDAC2)
    SHIP complex
     141140204 (HDAC2)
    MiDAC complex
     141140204 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     141140204 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    141140204 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    141140204 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 141140204
NCBI-ProteinID: XP_073483211
LinkDB
Position
LG04:complement(377091029..377162462)
AA seq 486 aa
MTYVIITLNQINFFSGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATA
EEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGA
VKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGD
GVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIF
KPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGG
GYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEK
IKQRLFENLRMLPHAPGVQMQAIPEDAIQEDSGDEEAEDPDKRISIRASDKRIACEEEFS
DSEDEGEGGRRNVADHKKGTKKARLEEDKKENDDKKSDVKEEDKSKDNTVEKMDTKGVKS
DQPSNP
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgacttatgttattattacattaaaccaaataaacttcttttcaggtgacattggaaac
tactactatggacaaggacaccctatgaagcctcataggatacgaatgacccacaactta
cttttgaactatggactctacagaaagatggaaatatatcgccctcacaaggccacagca
gaagagatgacaaagtatcacagtgatgaatacattaagtttcttcgatcgatcagacca
gacaatatgtctgaatacagcaaacaaatgcaaagattcaatgttggtgaggactgtccg
gtgtttgatggcctttttgagttctgtcagctttccactggaggctctgtggctggtgct
gtaaaactgaacagacagcaaactgacatggcagtaaactgggcaggagggcttcatcat
gcaaaaaaatctgaagcatctgggttttgttatgtgaatgacattgtacttgccatcctt
gaactcctaaaataccaccaaagagtgttatacattgacatagatattcatcatggtgat
ggtgttgaagaggctttctatactacagatcgggtcatgaccgtttcattccataaatat
ggggaatatttccctggcactggtgatctccgagatattggtgctggaaaaggcaagtat
tatgctgtcaatttcccaatgagggatggaattgatgatgaatcatacggacaaatattt
aagccaatcatttcaaaagtaatggagatgtaccagcccagtgcggtggttttacagtgt
ggtgccgattcattgtctggagatcgccttgggtgtttcaatttaacagtaaaaggtcat
gctaagtgtgttgaagttgtaaagacttttaacttacctctactcatgctcggtggaggt
ggatatactattcgtaatgttgctcgctgctggacatatgagactgctgttgcactggat
tgtgaaattccaaatgagctgccatacaatgattactttgaatattttgggccagatttc
aagcttcatattagcccttccaacatgaccaatcaaaatacacctgagtacatggagaaa
ataaagcagcgcttatttgagaatctgcgtatgcttccccatgcaccgggtgtacaaatg
caggctataccagaagatgccattcaggaggacagtggagatgaagaagcagaggaccca
gataagcgtatttctatacgagcgtctgacaagcggatagcctgcgaagaagagttttca
gactctgaggatgaaggtgaaggcggaagacgtaatgttgctgatcataaaaagggaaca
aaaaaagcaagacttgaagaggataaaaaggaaaatgacgacaaaaaatcggatgtgaaa
gaagaagataaatctaaagacaatactgtggagaaaatggacactaaaggtgtcaagtca
gatcagccaagcaatccctga

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