Aquarana catesbeiana (American bullfrog): 141140300
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Entry
141140300 CDS
T11018
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141140300 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141140300 (HBS1L)
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
141140300 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
141140300
NCBI-ProteinID:
XP_073483419
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All DBs
Position
LG04:complement(416908244..417123022)
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AA seq
686 aa
AA seq
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MARHRNVRGYNYDEDFEDEDMFGQSVEDDYCISPATAAQFIYSKRDRHSSFTEPLEEEEE
EEHDDELEKQKASNIALSSLDQARLFSCLEHMSEVLGETVSEQVMIDAALKCQFDVSKAL
ELVFKQDCNTNTSTKPVSQDLLSTEKPAKGRSRDLTSMEAQNEIVPKIAKMTVSGKKQKM
GFNIPSAASEVNGQGVPLTAKGQPMDDIVEESESTVPLTTQINTSQGSDELNAISQIKSS
GKSKQKINVKEELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGHVNKRTMHKYEQE
SKKAGKASFAYAWVLDETGEERQRGVTMDVGMTKFETKSKVITLMDAPGHKDFIPNMITG
AAQADVAALVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVAVNKMDQVNWQQDRF
REVTSKLGHFLKQAGFKDSDVFYVPTSGLSGENLAKCSQIPDLTSWYKGPCLIDQIDSFK
APQRSTDKPFRLCASDVFKDQGSGFCVTGKIEAGYIQTGDRILAMPPNETCTVKGITLHD
EAVDWAAAGDQVSLTLTGVDIIKINVGCVFCSQNEPIKACTRFRARVLIFNFDVPITQGF
PVIIHYQTVSEPATIRKLVSVLHKSTGEVVKKKPKCLTKGMNAVIELQTQRPVALELYKD
FKELGRFMLRYSGSSIAAGVVTEIKD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacaccggaacgtgcgggggtacaactatgatgaggattttgaggatgaagat
atgtttggacagtctgtagaagatgactattgtatttcaccagccacagctgctcagttc
atatattctaagcgggacagacactcaagctttactgagcctttagaagaggaggaggaa
gaggaacatgatgatgaactggaaaaacaaaaggcttcgaatattgctttaagttcatta
gaccaagctcgtttattttcatgcctggagcacatgagtgaagtcctgggagagactgtt
tcagagcaagttatgattgatgcggcattgaaatgtcagttcgatgtctccaaggccctt
gaacttgtgttcaaacaggactgcaacaccaacacaagcaccaaacctgtgagccaagac
ttgctttccactgagaaaccagcaaaaggcaggtcaagagacttgacttctatggaggca
cagaatgaaattgtccctaaaattgccaagatgactgtctctggaaagaagcagaaaatg
ggatttaatattccaagcgcagcatctgaggtaaatggacagggtgttcctttgactgca
aaaggccagcctatggatgacattgtggaggaatctgaaagcaccgttccattaaccaca
caaataaacacatcacagggctctgatgaacttaatgccatatctcaaataaaaagttct
ggaaaatccaagcagaaaattaatgttaaagaagagctagaaaagagacaaggaggaaaa
cagctgctaaaccttgttgtaataggccatgttgatgctgggaaaagcacacttatgggt
cacctattatatctcttgggacatgtgaataaacgaaccatgcacaaatatgagcaagag
tctaagaaagcaggaaaagcttcttttgcatatgcttgggtgcttgatgagacgggcgaa
gagaggcaaagaggagtgactatggatgtaggcatgaccaaatttgaaacaaagtccaaa
gttattactttaatggatgctccggggcacaaggattttatcccaaacatgattacaggt
gctgctcaagctgatgtggccgctttggttgtagatgccagccgtggggaatttgaagca
ggcttcgaagctggtggacagacacgtgagcatgcactgctggtccgctctcttggtgta
actcagcttgcagtcgcagtcaataaaatggatcaggttaactggcaacaagatcgattt
cgggaagttactagtaagcttgggcactttctgaaacaagctggatttaaggacagtgat
gtattttacgttcctaccagtgggctcagtggagaaaatctggccaaatgtagtcaaata
cctgatctgacaagctggtataaaggaccgtgccttattgaccaaattgattcatttaaa
gccccacagcggtccacagataaaccttttagactgtgtgcatcagatgttttcaaagat
caaggttctggattttgtgtgactggcaaaatagaagctggctacatacaaacgggtgac
cgcatactagccatgccacctaatgaaacatgcacagtaaaaggaatcacattacatgat
gaagcagtcgattgggccgcggcgggagatcaagttagtctcactttgaccggcgtggat
atcatcaaaatcaatgtaggatgcgtgttttgcagtcaaaatgaacctattaaagcctgt
acccgtttccgagccagagttctcatctttaactttgatgtccctataacccaaggtttc
cctgtaatcatccactatcaaactgtaagtgagcctgccactatcaggaagctggtcagt
gtcctacacaagagcacaggggaggttgtaaagaaaaagccaaaatgtctaacaaaagga
atgaatgctgtaatagagctacaaacacagagacctgttgctttagaattatacaaagac
tttaaagaacttgggaggttcatgttacgttacagtgggtcatccatagctgctggagtt
gtcactgagataaaagattga
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