Aquarana catesbeiana (American bullfrog): 141140402
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Entry
141140402 CDS
T11018
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141140402 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acat03021
]
141140402 (TAF5L)
03036 Chromosome and associated proteins [BR:
acat03036
]
141140402 (TAF5L)
Transcription machinery [BR:
acat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
141140402 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
141140402 (TAF5L)
Chromosome and associated proteins [BR:
acat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
141140402 (TAF5L)
STAGA complex
141140402 (TAF5L)
TFTC complex
141140402 (TAF5L)
SAGA complex
141140402 (TAF5L)
SLIK complex
141140402 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
TFIID_NTD2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_SPT8
RMC1_N
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR19_1st
DUF7165
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
Nbas_N
Mala_s_1-like
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
141140402
NCBI-ProteinID:
XP_073483640
LinkDB
All DBs
Position
LG04:459408194..459475109
Genome browser
AA seq
590 aa
AA seq
DB search
MKRVRAEQIQLAVTCYLKRRHYIDIEGSLKQGLRLCQTAEEMAANLTVQAESSCANAVSS
APCQVDPQQYELQFARLRNFLSEENCPYSQDVTSLLYPLFVYLHLDMVQNSLKSMVDSFY
SRFHGMFLHHPAQKDIIEQLQTTMTMQDIHSNFKLRAFLDNKYVVRLQEDSYNYLLRYLQ
SDNNSVLLKTLTLHIQLDVQPVRLTEYQLYTSDTFSSRGESNSLDTQDVPAPILQNEAAL
EQLQDCIKKVKDGPPSLTTVCFYAFYNTDNLLNTAEISPNGKLLAAGFDNSSVKLWSLRS
KKLKTRPHTVNVSHIRLACDILEEEGEDEDQAGSEMKILRGHCGPVYSTRFLSNSSGLLS
CSEDSSIRFWDLKTYTNTVLYEGHAYPVWDLDVSACSLFFASGSHDRTARLWSFDRTFPL
RIYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSSQQGNSVRLFTGHRGPVLALAFSPN
GRYLASAGEDQRLKLWDLASGTLYKELRGHTDNINSLSFSPDSSLIASTSMDNSVRVWDI
RNTYCNAPSDGSSSELVGVYTGQTNNVLSVQFMACNLLMVTGTAQEQQEH
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggtacgcgcagagcagattcagttggcagtaacttgttatctcaaacgccgt
cactacatagatatagaaggatccttaaaacaagggctgcggctttgtcagactgcagag
gagatggcagctaatctaactgtacaagcagaatcaagctgtgccaatgcagtgtcttca
gcaccctgccaggttgacccacaacaatatgaattgcagtttgcacgacttcgaaatttc
ctttcagaagaaaattgtccttatagtcaagatgtgacatctctactatatcctctcttt
gtctacctccacctggacatggtccaaaatagccttaaaagcatggtggatagcttctac
agtcgcttccatggcatgttccttcatcatccagcacagaaagatataattgaacaactt
cagactaccatgaccatgcaagacattcactcaaactttaaactgagagcatttctagat
aacaagtatgtggtccgtctgcaagaagacagctacaactaccttctgcgctaccttcaa
agtgataacaatagtgtccttctcaaaacactcactctgcacatccaactggacgttcaa
cctgtcagactcacagagtaccagttgtatacaagtgatacattttcttcaagaggagag
agcaacagccttgacacgcaggatgttccagctcctattttgcagaatgaagcagctctt
gaacagctgcaagactgcataaagaaagtcaaggatgggccaccttcattgacaactgtg
tgtttttatgcattctacaacactgacaacttgctgaatacagctgagatctctcctaat
ggcaaacttctggctgctggatttgacaactcttctgtgaaactctggagtctgaggtca
aaaaaactgaaaacacggccacacaccgtaaatgtttctcacatacgactagcttgtgat
atcttagaagaggagggcgaagatgaagatcaggctggtagtgaaatgaagatacttaga
ggacactgtgggccagtttacagtacccgtttcctttccaatagctctggccttttgtca
tgctctgaagattcatccattcgcttttgggaccttaaaacctacacaaacactgtcctg
tatgaaggccatgcatatccagtctgggatttagatgttagtgcctgtagcctttttttt
gcaagtggttctcatgatcgcacagccaggttgtggtcatttgataggacatttcctctc
agaatatatgcaggccatttagctgatgttgactgcattaaattccatcccaactcaaat
tatcttgccacaggatctactgataagacagttcgattatggagcagtcagcaaggaaac
tctgtaagactcttcactggacacagagggcctgtgcttgcccttgctttttccccaaat
ggaagatatctggcctcagctggggaggatcaacgtcttaaactatgggatttggcttcg
gggactctctataaagagctgagaggtcacactgacaatatcaacagcctttcattcagt
ccagacagcagcctaattgcctctacatctatggataactctgtccgtgtatgggatatt
cgaaatacttattgcaatgccccttctgatggttcttctagtgaactagttggtgtatac
acagggcagactaataatgtgttgagtgttcaatttatggcatgtaatctacttatggtt
actggaacagcacaagaacagcaggaacattga
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