Aquarana catesbeiana (American bullfrog): 141140642
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Entry
141140642 CDS
T11018
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
141140642 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acat03021
]
141140642 (POLR1B)
Enzymes [BR:
acat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
141140642 (POLR1B)
Transcription machinery [BR:
acat03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
141140642 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
30K_MP_C_Ter
Motif
Other DBs
NCBI-GeneID:
141140642
NCBI-ProteinID:
XP_073484135
LinkDB
All DBs
Position
LG04:complement(565909144..565948928)
Genome browser
AA seq
1185 aa
AA seq
DB search
MLVLVLRRLAEVRHGQHVCNDHTPSASTCVAEYLALCVVFSRGLCVLPAIMDWTQKWDKL
PREPSLKKLTDPGYGKPGKKQHPPLQDITRAHIESFNQAMTEGLFQAVQAIKPMEFSFKN
ARVSFQIVDAVISQPLVPKGSLCKDPKVYPAECRGRRCTYHGRLTVDISWSVNDVPSGVI
KQSLGYVPIMVKSKLCNLHGLSPKQLVQHHEEEQEMGGYFIINGIEKVIRMLIMPRRNFP
IAMIRPKWKSRGPGYTQYGISIRCVRDEHTAVNMNLHYLENGSIMVNFIYQKELFFIPLG
FALKALVNFSDYQIFSELVKGKEENSFYRDCVTQMLRGVMEEGCHSQQQVLKYLGERFRV
KFYLPDWYTDEQAAEFLLEQCICIHLKSNLEKFHMLCYMTRKLFTFAKEECMEENPDSLM
THEVLTAGQLFLMFLKEKMEGWLVATKLTLDKRAQKPNLVLNTESIMKIFGRTTDLTQAC
EYLLATGNLRSKTGLGMLQASGLAVVADKLNFIRYLSHFRCVHRGAAFAKMRTTTVRRLL
PESWGFLCPVHTPDGEPCGLMNHMTVTCEIVTQTSINAHVQVLLCTLGVVPVDGIPGKSL
ADCYQVMLDGAMVGWIDKDLAPNLVSALRTFKVTQEKKIPPWTEIVLIPMTGKASLYPGL
FIFTTPCRMVRPVRNLAVGKEELIGTLEQIFLNIAIYESEIVSGVTTHQELFPHSLMSVV
ANFIPFSDHNQSPRNMYQCQMGKQTMGFPLMTYQDRSDNKLYRLQTPQSPLVRPSMYDYF
DMDNYPVGTNAIVAVISYTGYDMEDAMILNKSSWERGFAHGSVYKTEFVDLSQKVKSSED
NLVFGIKPGDERVMGRLDEDGLPPVGAILKFGDPFYSYLNQSTGENFIMYYKSKEDCVVD
NIKVCSNDLGIGKFKSVCITMRVPRNPTIGDKFASRHGQKGILSRLWPSEDMPFTESGMV
PDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALEYFGEMLKAAG
YNYYGTEKLYSGISGEELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPVGGRN
IQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSEAHVCLECGSLLSPLLEKPPPSWSS
MRNRKHYCSICNRSDTIDTVSVPYVFRYFVAELAAMNINVKLNVS
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtcctggtattgcggagactggcggaagtacgtcacgggcagcatgtgtgcaat
gaccacaccccctccgccagcacatgtgttgctgagtacctggctctgtgtgtggtgttc
agcagaggactgtgtgtccttcctgccatcatggactggactcagaagtgggataaactg
cccagggagccaagtctgaagaagctgacagaccctggctatgggaagcctggaaagaag
cagcaccctcctctacaggacatcaccagagctcacatcgagtccttcaaccaggccatg
acagagggactcttccaggcagtgcaggccataaaaccaatggaattcagttttaaaaat
gctcgtgtatcatttcaaattgtggatgcggttatcagccaacccctggtccccaaggga
agcctctgtaaggatccaaaggtttacccggctgaatgtagagggcgaaggtgcacctac
catggaaggctgactgtggatataagttggtctgttaatgatgttcccagtggtgtcatc
aagcaatcccttggttatgttcccatcatggtaaaatccaagctttgtaacttacatggc
ctttcaccgaagcagcttgtgcagcatcacgaggaggagcaggaaatgggtggctatttt
ataatcaacggtatagaaaaggtgattcggatgctaattatgccaagaaggaattttcct
attgcaatgattcgccccaagtggaaaagtagaggtcccggttatacccaatatggtata
tcaatacgttgtgtcagagatgaacacacagctgtgaatatgaacctacattatttagag
aatggctctataatggtgaatttcatctatcaaaaagaactcttcttcattcctcttggc
tttgcgctgaaggcacttgttaacttctcagattatcagatattctcagagttggttaaa
ggcaaggaggaaaactccttttacagagactgtgtcacccagatgctcagaggcgtgatg
gaggaaggttgtcacagtcagcaacaagttctcaagtatcttggagagcgattccgggtc
aagttctacctcccagactggtatactgatgagcaagcggcagagttccttctggaacag
tgtatttgcatacaccttaaatccaacttagaaaaattccacatgctgtgctacatgact
cgaaagcttttcacttttgctaaggaagagtgtatggaggaaaatcctgacagcttaatg
acccatgaggttttgaccgcaggacaactgtttctcatgtttttaaaggaaaaaatggaa
ggttggcttgttgctaccaaactcaccttggacaagagagctcagaaacccaatttagtt
ctaaacacagagtccatcatgaaaatattcggtagaacaactgatctcacacaagcctgc
gaatatttgctggctactggaaatcttcgctctaaaactggtcttggtatgctccaggct
tctggtctggcagtagttgcagacaagttgaacttcattcgatatctctcacacttccgc
tgtgtgcacagaggtgctgcatttgcgaagatgagaaccacaactgtccgtcgtcttcta
ccagaatcttggggttttctatgtccggtacacacacctgatggcgagccctgtgggcta
atgaatcacatgactgtgacatgtgaaattgtgacgcagacctccatcaatgctcacgtg
caggttttgctatgcacattaggtgtcgttccagttgatggaattccaggaaagtcttta
gcagactgctatcaggttatgctggatggtgccatggtgggctggatagataaagacttg
gctccaaatcttgtcagtgctctaagaacctttaaggtaacgcaggaaaaaaagattcca
ccctggacagaaatagtgttgattccaatgactgggaaggccagtctgtatcctggactt
tttatcttcaccactccttgtagaatggttcgtcctgtcaggaatctagctgttgggaaa
gaagagcttataggaacattagagcagatctttttgaacatagcgatatatgaaagcgaa
attgtctctggtgtcaccactcatcaagagctctttccacacagtctgatgagtgtggta
gccaacttcattcccttctctgaccacaaccagagccccaggaacatgtaccagtgccag
atgggtaaacagactatgggctttccactaatgacctaccaggatcgttctgacaataaa
ttatatcgtctccaaaccccacagagtccgctagtacgcccctctatgtatgattacttt
gacatggataattatcctgttggcaccaatgctattgtggccgtcatttcatacaccgga
tatgatatggaagatgctatgattttaaacaagtcatcttgggagagaggatttgcccat
ggcagtgtgtacaaaacagaatttgtagatctttcacaaaaagttaaaagtagtgaggac
aatttagtgtttggcatcaaaccaggagatgagcgggtgatgggaagactggatgaagat
ggcctacctccagtgggagctatcctgaaatttggagacccattctatagttatctcaat
caaagtactggagagaacttcattatgtattacaagagtaaagaagactgtgttgtagac
aacatcaaagtttgcagcaatgacctgggcattggaaagtttaaatctgtttgcatcacc
atgagggtgccacgaaacccaactatcggagataaatttgccagccggcatggccagaag
ggcatcctcagtagactctggccatcagaagatatgccattcactgaaagtggaatggtt
ccagacattctgttcaacccacatggtttcccatcaagaatgaccattggaatgttgata
gagagcatggctggcaaatcagcggccttgcatggtttgtgccacgatgccacacctttt
accttctctgaagagaattcggctctggaatattttggtgagatgctgaaggcagctggc
tataactactatggcacagagaaactatacagtggcattagtggggaggagctagaggca
gacatttttattggtgtggtctactaccagcgactgcgtcacatggtttctgacaagttc
caagtgaggacaacaggagctcgagacaaggtgaccaaccagcctgtgggtggcaggaac
atacagggaggtatacgctttggagagatggaacgtgatgctttgttggctcatggtaca
tccttcttgctccatgatagactttttaactgttctgataggtcggaggcccatgtgtgt
ttagaatgtggcagcctcctgtcccctttactagagaagcctcctccatcctggtcatcc
atgcggaacaggaagcactattgttcaatctgcaatcgttctgatacaattgacactgtg
tctgtgccttacgtatttcgatattttgtggccgagttggcagcaatgaacatcaatgtt
aaactaaatgtcagttaa
DBGET
integrated database retrieval system
