Aquarana catesbeiana (American bullfrog): 141140953
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Entry
141140953 CDS
T11018
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
141140953 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acat03400
]
141140953 (MSH2)
DNA repair and recombination proteins [BR:
acat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
141140953 (MSH2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
141140953
NCBI-ProteinID:
XP_073484614
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Position
LG04:659524216..659701789
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AA seq
930 aa
AA seq
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MAVQPKEKLSMDSGAESGFLSFYFSMPDKPETTVRVFDRSDYYTVHGSDATFAAKEVFKT
NGVIKYLGSGNKKLESVVLSKMNFESVVRDLLLVRQYRVEVYKNKSSSKSSNDWHLAFKA
SPGNLTQFEEILFGNNDMSSAVGVVGVRLVSSEGQRVVGVGYVDSTLRRLGVCEFSDNDQ
FSNLESLLVQIGPKECVMPGGDSAGDMAKLRQIVQRGGILITDRKKAEFTTKDSVQDLNR
LLKAKKGEQVNSAALPEMEKQVAMSSLSAVSKYLELLSDESNFGQFVMTSFDLSQYMKLD
NAAVGALNLFPGTAEDTSGTQSLAGLLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLV
EAFVTDVELRQSLQEDLLRRFPDFNRLAKKFQRQNANLQDCYRLYQSVNQLPNVVQTLEK
YEGSHQMLLLAVFVTPLTDLSSDFYKFQEMIETTMDMEQVENHEFLVKASFDPNLTELRE
KMDELEKSMQASLNSAARELGLDAGKSIKLESNAQLGHYFRVTCKEEKALRNNKKFSTID
IQKNGVRFTNSKLSSYNEEYMRYREEYEEAQNAIVKEIINISAGYVDPIQTLNDVIAQLD
AIVSFAFVSNGAPVPYVRPIILEKGQERIVLKSARHPCIEVQDDVAFIPNDISFEKEKQM
FHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDYAEVSIVDCILARVGAGDSQLKGVS
TFMAEMLETASILRSATENSLIIIDELGRGTSTYDGFGLAWAISEYISTKIQAFCLFATH
FHELTALADQVPSVNNLHVTALTTDETLTMLYRVKKGVCDQSFGIHVAELANFPKHVIEN
AKAKALELEEFQFIGASADSEDEPACKRRYLEKEEGEKIIQDFLAKVKALPLTEMSEQEI
KTRLNELKADVLARNNGFVNEVICRTKAAC
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcaaccgaaggagaagctgtctatggacagcggggcggagagcggcttcctc
agcttctacttctccatgccggacaagccggagaccaccgtgcgggtgttcgacaggagc
gactactacacggtgcacggcagcgatgccaccttcgccgccaaggaggtcttcaagact
aacggggtcatcaagtacctgggatcagggaacaagaaattggagagcgtggtactcagt
aaaatgaactttgagtctgttgtgagagatctgcttcttgttcgtcagtatcgggtggaa
gtttacaaaaataagtcttcaagcaaatcctccaatgactggcacctggcatttaaggcc
tctccaggaaacctcactcagtttgaagagatcttgtttggcaataatgacatgtcctct
gcagttggcgttgttggtgtccgtctggtcagctctgaaggtcagagagtggtcggtgtg
ggttatgtggattccacgctgaggcggctgggagtttgtgaattctcggataacgatcag
ttctccaatctggaatccttgctggttcagatcgggcctaaagagtgtgtgatgcctgga
ggagatagtgccggagacatggcaaaattgagacagattgtccagagaggtgggattctg
atcacagacaggaagaaggcagagttcactacaaaggacagcgtccaggatcttaaccgt
ttgttgaaagccaagaaaggagaacaagtcaatagtgctgcattaccagagatggagaag
caggttgcaatgtcttctctctcagccgtttcgaagtatctagagctgttgtcagatgaa
tccaactttggccagtttgtaatgaccagctttgacctgagccagtacatgaagctggat
aacgcagcagttggtgccttaaaccttttcccggggacggctgaagacacaagtggcaca
cagtctctagctggcctattaaacaaatgcaaaactccccaaggccaaagattggtcaat
cagtggatcaagcagccccttatggacaagaaccgaattgaagagaggctgaacttggtg
gaggcgtttgtgaccgatgtggagctcaggcagagtcttcaggaagatcttctacgtcgt
tttccagattttaaccggttggcgaagaaattccagaggcagaatgcaaacctgcaagat
tgctacaggttgtaccagtcggtgaaccagctgcccaatgtggtgcagaccctggagaaa
tatgaagggtctcaccagatgctcctgctggccgtttttgttactccactcactgatctt
tctagtgacttctacaaatttcaggaaatgattgaaaccactatggacatggagcaggta
gaaaaccatgaatttttggtaaaggcgtcctttgatccaaacctgacggaactgagagag
aagatggatgaactggagaagagcatgcaggcgtctcttaacagtgcggccagggagttg
ggattggatgctggaaaaagtatcaaacttgagtccaatgctcaacttgggcactatttc
cgtgtgacctgcaaggaagaaaaggctctgagaaacaataagaagttctccaccattgac
atccaaaaaaatggagtgagattcaccaacagcaagctgagctcatataatgaggaatac
atgaggtacagagaggagtatgaagaggctcagaacgccattgtgaaagaaatcatcaac
atctctgctggttatgtggatccaattcagacactgaacgatgtaatagctcagctagat
gccattgtcagctttgcctttgtttctaatggagcgccagtaccatatgttcgtcctatc
atcctggagaagggacaggaacgtatagtgctgaaatctgccagacacccgtgcattgaa
gtgcaggatgatgtggcgttcattcccaatgatatatcgttcgagaaggagaaacagatg
ttccatattatcactggtcctaatatgggtggaaaatccacctatattcgccagactgga
gtaatagtcctcatggcccagattggctgttttgtaccatgtgactatgcggaggtgagc
attgtggattgcattcttgctcgggtcggagctggggacagtcagctcaaaggagtgtca
accttcatggctgagatgttggagacggcttcaatcctcagatcagcaaccgagaactct
ctgatcatcattgatgagctgggcagaggcacctccacctatgacggttttggcctggcc
tgggcaatctccgagtacatctctactaaaatccaggccttttgtttgtttgccactcac
ttccatgaactaaccgcactggctgatcaggtgcccagtgtgaacaatttacatgtcacg
gcgcttacaacagatgagaccctgaccatgctctaccgtgtcaagaaaggtgtctgcgat
cagagctttggaatacatgtagcggagctggctaactttccgaagcacgtaatcgaaaat
gccaaagcaaaagcattagagttggaggaattccagttcattggggcttcagcagactct
gaggatgaaccagcctgcaagaggcgctacctagaaaaagaggaaggggagaagataatt
caggattttctcgccaaagtgaaagctcttccacttactgaaatgtctgagcaggaaata
aaaaccagactgaatgagctgaaggctgatgttctggccaggaataatggcttcgtcaat
gaagttatctgccgcacaaaagctgcatgctga
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