Aquarana catesbeiana (American bullfrog): 141140955
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Entry
141140955 CDS
T11018
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
141140955 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acat03400
]
141140955 (MSH6)
DNA repair and recombination proteins [BR:
acat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
141140955 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
PWWP
MutS_II
MUM1-like_PWWP
AAA_29
Motif
Other DBs
NCBI-GeneID:
141140955
NCBI-ProteinID:
XP_073484618
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All DBs
Position
LG04:660542645..660568468
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AA seq
1335 aa
AA seq
DB search
MAKQSTLFSFFAKSPTLSTSRTKSGSSSSPTEADLPSLGGKKNNSPPKESAGAPKHGGKT
PRASTPSVCDFSPGDLVWAKMAGHPWWPSLVYNHPNEDTHFRGKGKSLHVHVQFFDDPPT
RGWIGVKYVKNYSGSSAAEAQKGGMFFSTRPEITKAMKMADDALKTEKDKRLALAVCTEP
SDSEEEMEVEESSPVSDEEEPERKSNRPARQSKSNGKAKRRRIIVASDSEDECSDDEFKP
DEKDAGSSDEASSGVDEETITSESEVEEDSPVKVPVKRKRGGGTSRTPASKKSLQNEISE
TPKRTSNVSAEAKLKLSSFSAPESFESQSTTGAAGGVTVWEHEKFEWLQDGRRKDGNRKK
QSDENYDPTTLYVPDDFLNKCTPGVKKWWQLKSQIFDTVIFYKVGKFYELYHMDAVIGVN
ELGLTFMKGTWAHSGFPEIAFGRFSDVLVQKGYKVARIEQTETPEMMEARCKSMSHPTKF
DRVVRREICRIITKGTQTYSVLDGSPSESHSKYLLSFKEKPDDSSGHQRVYGVCFVDTSV
GKFHIGQFYDDRHCSRFRTLVAHFPPVQILFEKGNPSSDTKRVLKSGLSTAIQEGLQATS
QFWDGTKTLKTLAEEGYFVKEGKGDHDNGTLPPVIKNMTSDSDSLALTPGEKSELALSAL
GACIFYMKKCLIDQELLSMGNFEEYVPVDVDIEKAQSSTSFFAKTSQRMVLDGVTLTNLE
ILQNGTNGSTEGTLLEKLDTCFTPFGKRLLKQWLCAPLCNPFSINDRLDALEDLMAIPEK
VTEVGELLKKLPDLERLLSKIHSIGSPLKSQNHPDSRAVMYEETTYSKKKIGDFLSALEG
FKVMREVIKVMDDAVDDFKSNILKQVVALKDKHPKGRFPDLSSELKRWDTSFDHEKAKKT
GVITPKAGFDPDYDEALRDIKTAEQNLTDYLEKQRKRLGCKNIVYWGTAKNRYQMEMPES
VTERNLPEEYELKSTKKGYKRYWTKTIEKLFGELVNAEERRDAALKDCMRRLFYNFDKNC
KEWQTAVECFAVLDVLMCLAQYSRGGDGPVCRPVVALPDDTSPYLELRGSRHPCITKTFF
GDDFIPNDVVIGCKDEDCNEDNNGASCVLVTGPNMGGKSTLLRQAGLLVVMAQLGCYVPA
EVCRLTPVDRVFTRLGASDRIMSGESTFFVELSETSSILQHATEHSLVLLDELGRGTATF
DGTAIASAVVKELSERIRCRTLFSTHYHSLVEDYSHTPAVRLGHMACMVENECEDPSQET
ITFLYKFIQGACPKSYGFNAARLANIPDDIIQSGHRKAREFESIMLSVKIFRQLNTLLDE
HTSDLQAINKLLEML
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagagcactctgttcagcttcttcgccaagtccccgaccctgtccacgagc
cgaaccaagagcggctcgtcctcctcacccaccgaggccgacctaccctccctggggggg
aagaagaacaactcccctccgaaggagtcagcgggggccccgaaacatggagggaagacc
ccccgggccagcacccccagtgtttgcgatttctcacctggtgaccttgtttgggccaag
atggcaggtcacccctggtggccgtcattagtttacaaccaccccaatgaagacacacat
ttcagaggaaagggcaagtctcttcatgttcatgtgcagttctttgatgacccaccaact
agaggatggataggtgtaaaatatgtgaagaattattcaggttcctctgctgcagaagcc
caaaaagggggcatgtttttcagtaccaggcctgaaataactaaagcaatgaaaatggca
gacgatgcactgaaaacggaaaaggacaagagactggcactggctgtttgcacagaacct
tctgattctgaggaggaaatggaggtcgaggaaagttctccagtaagcgatgaagaagaa
ccagaaagaaaatcaaaccgtccagctcggcaaagtaagagtaatgggaaggccaagagg
agaagaataattgttgcgtctgacagcgaagatgagtgctctgatgatgagttcaagccg
gatgaaaaggatgctgggagcagtgatgaggccagcagcggtgtagatgaggagacaatc
acttcagagagcgaagtggaggaagacagtccagtaaaggttcctgtgaaacgcaagcga
ggtggtggtacttccaggactccagcttctaaaaagagtctgcaaaatgagatttcagaa
actccaaagagaacaagcaatgtatctgcagaagccaaactaaagctgtcgtccttctct
gccccagaatcttttgagtctcagtcgaccacaggtgctgctggaggggttactgtttgg
gaacatgagaagtttgagtggctgcaggatggccggagaaaagatggcaatcgcaaaaag
cagagtgatgaaaattatgacccaacaacactgtatgttccagatgattttctcaataaa
tgcactccaggagtgaagaaatggtggcagctcaaatctcagatctttgacacggtcata
ttctacaaggttgggaagttctatgaactgtaccacatggatgcggttattggcgtcaat
gaattgggcctgaccttcatgaagggaacttgggctcactcaggttttccagagattgct
tttggccgattctctgatgttctggtacagaagggatacaaagtagccaggatagagcag
acagaaaccccagagatgatggaagcgcgttgcaagtcaatgtctcatccaaccaaattt
gatcgggtggtgcggagggaaatatgtagaattattacaaagggcacccagacctacagt
gttcttgatggaagcccctctgaaagccatagtaaatatcttttgagctttaaggaaaaa
ccagatgattcctctgggcatcagagagtatatggtgtgtgctttgtggacacctcagtg
gggaaatttcacattggtcagttttatgacgatcgccattgttcaaggttcaggactcta
gtagcacactttcctccagttcagatactgttcgaaaaaggcaacccttcatctgacaca
aagagggttcttaaaagcggtttgtccactgcaattcaagagggtttgcaagctacctcc
cagttttgggatggcacaaaaacactaaagaccctggctgaggaaggctactttgtgaaa
gaaggcaaaggtgaccatgataatggcactttaccccccgttattaagaacatgacttca
gacagcgactcgctggcacttacccctggagaaaagagtgagctggctctttctgctttg
ggggcatgcattttttacatgaaaaaatgtctcattgatcaggagttgctttctatgggc
aactttgaagaatatgttccggttgatgttgacattgaaaaggcccaaagctcaaccagt
ttctttgctaaaaccagtcagcgaatggtgcttgatggggtaacactaaccaatctagaa
atcttacagaatgggaccaatgggtctactgaaggtacactgctggaaaaactagacacg
tgcttcactccttttggaaaacgcctcttaaaacagtggctttgtgcacccctgtgcaat
cctttttcaattaacgatcgtctagatgcactggaagatctcatggctatcccagaaaaa
gtgactgaagtgggagagcttctgaaaaaacttccagatctggagagacttctgagcaaa
attcacagtattggctcaccactgaaaagccaaaaccacccggacagcagagcggtgatg
tacgaggagactacatacagcaaaaagaagatcggagatttcctttctgctctggaaggt
tttaaggtgatgcgtgaagtcatcaaggttatggacgatgccgttgatgattttaagtct
aatatcctcaagcaggttgtggctcttaaagataaacatcctaaaggtcgattcccagac
ttatcgtctgaactgaagaggtgggacacttcattcgatcacgagaaggctaaaaaaaca
ggggtgattacccctaaagctggctttgacccagactatgatgaagcactgagagatatc
aagactgcagagcagaatcttacagactatctggagaaacaacgcaagagacttgggtgt
aaaaatatagtgtattggggaacggcgaagaatcgctaccaaatggaaatgccagagagt
gtaacggagcgcaatctgccagaggagtacgagctcaaatccacaaagaagggctacaaa
cgttactggacaaagaccattgagaagctttttggtgagctggtgaatgcagaagagcga
agggacgcagcactaaaagattgcatgaggaggttgttttacaactttgataaaaactgc
aaagagtggcagacagccgtggaatgctttgctgtgctcgatgtcctcatgtgtcttgct
cagtacagccgtggtggtgatggaccagtttgtagacccgttgtagctttgcctgatgac
acgtcgccttatttggagcttagagggtcccgccacccttgtattacaaaaacctttttt
ggagatgactttattccaaacgatgttgtgattggctgcaaggatgaggactgcaatgag
gacaataatggcgccagctgtgtacttgtgacgggtccaaacatgggtgggaaatccact
ctactcagacaagccggtctcctggtggttatggcacagctgggatgttatgtacccgct
gaggtttgtagactgactccagtggacagagtctttacaagactgggagcatcagacaga
attatgtcaggtgaaagtacgttttttgtggagttgagtgaaacctccagtatacttcag
catgcaacagaacattcccttgtgcttctggatgaacttggtcggggcacagctacattt
gatggaacagctatagctagtgctgtcgtaaaagaactctctgaacggatcagatgccgc
acattgttttccacacactaccactcattggtggaggattactcccacacacccgccgta
cggcttggtcatatggcctgtatggttgaaaatgagtgtgaagatcccagccaggagact
attactttcctatacaagtttatccagggggcatgtccaaaaagctatggattcaatgca
gcaagactggctaacataccagacgatatcattcagagtggtcacaggaaagcgagggag
tttgaaagcatcatgctgtctgtgaagatattcaggcagttgaacacgttgctggatgaa
catacttcggatttgcaagcgatcaacaaactactggaaatgctttaa
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