Aquarana catesbeiana (American bullfrog): 141141082
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Entry
141141082 CDS
T11018
Name
(RefSeq) WD repeat-containing protein 43-like
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141141082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acat03009
]
141141082
Ribosome biogenesis [BR:
acat03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
141141082
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Utp12
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_VPS8
Beta-prop_TEP1_2nd
Beta-prop_EML
DSE1_N
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
Beta-prop_WDR41
CFAP251_N
Beta-prop_WDR75_1st
WD40_like
Beta-prop_DCAF4
Paf1
Motif
Other DBs
NCBI-GeneID:
141141082
NCBI-ProteinID:
XP_073484890
LinkDB
All DBs
Position
LG04:691209100..691228155
Genome browser
AA seq
656 aa
AA seq
DB search
MAAAAAGGVYEALPPASAFTPGRRDLLAVSGLDGRITVWDSRGGGGELRREYVPSAHLSA
TCTCLAWGGPNRGGQESHQKKKRKSEAVDKDGKYDLLAIGTATGTILLYSVIKGELQSKL
VGGHDSRVNCIRWHQDSACLYSCSEDKHIIEWNTQTCKVKCKWKGDNGGVSCLCISPDGK
MLLSAGRTIKLWDLETKNLTRQFTGHSSAVTSLIFIRPPGESHSSCDTMGLYFLSGAAND
RLISVWQVRTDKKEKNAVLSFTLSESPVAVDLAPSLSKDEPMKLAVVCRDGQMHLFRHIL
NGNHKKPVAPTSTVQIATSGNDESATPTPVPILSAGFYPDGESLLLYYGSTMQPVIEKVA
FQTDERHVCLVRDVHKSMSLRKEVAVTKVKTPVVNKDTNVLVPGIPGHGAALSVTSPKPD
GKRKPDDKQATIEERLGAMDLDLPKVQSKGGLPQTDNFSVLLVQGLESNDPHILNKVFQT
KNETLIKKTVSRIPVYAVLPLVHELTKRLQGHPSSAILMVRWMKSVLVNHVSYLSSLPDL
VPQLGSLYQLMETRVKTLNKMSRLNGKLYLLITQVATSEISQRIQANQEAQVVYEEESSD
EESGEEQNTDSDDNWEEEEDEDDGESETSGDSEEDMNVDKVNGDSDGDPGNESEEE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgcagcgggcggcgtgtacgaggcgcttccccccgccagcgccttcacc
ccggggaggagagatctgctggccgtgtccggcctggacgggaggatcaccgtgtgggac
agccgaggagggggaggggagctccgccgggagtacgtgccttccgctcacctctccgcc
acctgtacatgcctggcctgggggggccccaaccgaggggggcaggaaagtcatcagaaa
aagaagaggaaatcggaagcggttgataaagacggaaaatacgacctcctcgccatcggc
acggcgaccggcaccatattattatacagcgtcatcaaaggggaactacaaagcaaattg
gttggtggccacgacagccgagtaaactgcatcaggtggcatcaggacagcgcttgtctg
tacagttgttcagaagacaaacacatcatagaatggaacacacagacctgcaaagtgaaa
tgcaaatggaaaggagacaatggcggggtcagctgtttgtgtataagtccagatggaaaa
atgttgctgtctgcggggcggacgatcaaactgtgggacctggaaaccaaaaacctgacc
aggcaattcactgggcactcatcggccgtcacatccctcatcttcatccgacctccaggg
gagtctcactcatcctgtgacaccatgggcctgtatttcctgtctggagcagcaaacgat
cggttaatcagtgtgtggcaggtccggactgacaagaaagagaagaacgcggttctgtcc
ttcaccctctcagagtctccggtggctgtagacctggcgccctccctcagcaaagatgag
ccgatgaagctggccgtggtgtgccgcgatggacagatgcacttattccggcacatatta
aatgggaatcataagaagccggtggcccccaccagtacagtacagatcgccacgtccggc
aacgatgagagcgccacaccaacgccggttcccatcctctctgccggcttctacccggac
ggagagtctctattactttactacggcagcaccatgcagcccgtcatcgagaaagtggcc
tttcaaacagatgaacggcacgtatgcttagtacgagacgtccacaagtcgatgtcgctt
agaaaagaagtagccgtaaccaaggtgaaaacgcctgttgtaaataaagacacgaatgtc
ctggtccccggaatccccggacacggcgctgctctatcggtaacgtctccgaagccggat
gggaagcggaagcccgatgacaagcaggccaccatcgaggagcggctcggcgccatggat
ctcgaccttcccaaagtgcagagtaaagggggactgccacagacagacaacttctccgtg
ctgcttgttcaaggtttggaaagtaacgacccccatatcttaaataaagtatttcaaacc
aaaaacgagaccttaataaagaagacggtgtcgcggataccggtgtacgccgtcctaccg
ctagtacatgagctcaccaaaaggttacaaggacatccgtccagtgcgatattgatggta
cgctggatgaagtcggttcttgttaatcacgtctcctatctttcttcgttaccagatctg
gtccctcagctcgggtccctctatcagctcatggagacgcgggtgaagacgctgaataaa
atgtccagactgaatggaaagctttatcttctcatcacacaggtggccacatctgagatc
tcacagaggatacaagccaaccaggaggcccaagtcgtgtatgaagaagagtcttcagat
gaggaatctggagaggagcagaatacggactctgatgataattgggaggaggaggaagac
gaggatgatggagaatctgagacatcgggagattctgaggaggacatgaatgtggacaaa
gtaaatggcgattctgatggagatccggggaatgaaagtgaagaagaatag
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