Aquarana catesbeiana (American bullfrog): 141141362
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Entry
141141362 CDS
T11018
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat00100
Steroid biosynthesis
acat01100
Metabolic pathways
Module
acat_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
141141362
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
acat01006
]
141141362
Enzymes [BR:
acat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
141141362
Prenyltransferases [BR:
acat01006
]
Terpene biosynthesis
Squalene/phytoene synthase
141141362
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
141141362
NCBI-ProteinID:
XP_073485127
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All DBs
Position
LG04:complement(45124262..45201566)
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AA seq
391 aa
AA seq
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MEFLRSLFYPKEIYNLIRYKMGGLTEVEQDPMSASLQTCYKFLEKTGRSYAFVIQALEGE
LRHAACIFYLVIRAVDTVEDDPTISLKTKIPILTNFHNFLYQPDWRFMDSKQKNRIVLED
FPTISREFRNLAVVYQEVIANAVRELALGMVECLPKQIESVQDWDKYCHFASSPTVIGLS
VMFSVSGLEDPIVGEDTRVSISVSLLMQKINVIRDFLEDQLNGLELWPKEVWSKYGKNLS
DFTKPENIVPAVQCLNELITNILQHVPDVLLYLSRLQNQRVFKFCAVPLMMAIATLATCY
NNQQLFKGKVKIRKGQTVTLMMDTTDMQAVRAITCQYVEEICKKIPPKDPSSEQTQNIIA
SIRKLSMPDGATGGPQLVAPEQDSGLVHMGQ
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagttcctgaggtcactcttctatcccaaggagatctacaacctcatcaggtacaag
atgggcggcctgaccgaggtggagcaggaccccatgagtgcgagcctgcagacctgctac
aaattcttggagaagacgggcaggagctacgcatttgttatccaggccttggaaggggag
ctacggcatgcagcctgtatcttctatctggttataagggctgtagacactgtggaggat
gacccgactatcagtctgaagaccaagatccccattctgacaaatttccacaacttcctg
taccagcctgactggaggttcatggacagcaagcagaagaatcgcatagttctcgaggat
ttcccaacaatctctcgggagtttaggaatttggctgtggtctaccaggaggtgattgcc
aatgctgttcgtgagctagcgctggggatggtggagtgcctaccaaagcaaatagagtct
gtacaagattgggacaagtactgtcatttcgcatctagtccaactgtaattggcctgtca
gtaatgttctctgtctcagggctggaagaccccatagtaggagaggacacaagggtctcc
atctctgtaagtctgttaatgcagaagatcaacgtcatccgtgatttcttggaagaccag
ctgaacggactagagttgtggccaaaagaggtgtggagtaaatatgggaagaacttgtct
gactttaccaagccagaaaatattgtgccagccgtgcagtgtctaaacgagctcatcacc
aatatcctgcaacatgtgcctgacgtcttgctgtacctgtcccgactgcaaaaccagaga
gtgttcaaattctgtgcagtcccgctgatgatggctatcgctacattggccacctgctac
aacaaccagcaactgtttaaaggaaaggtaaagatccggaagggccagacagtgactctg
atgatggacactacggatatgcaggctgtaagagccatcacatgtcagtatgtggaggag
atctgtaaaaagattcccccaaaagacccatcatctgagcagacgcaaaacatcatagct
tccattaggaaactaagcatgcccgatggtgctactggtggccctcagctggtagcacct
gagcaagattcaggactggtccacatgggccagtga
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