Aquarana catesbeiana (American bullfrog): 141144182
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Entry
141144182 CDS
T11018
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acat04131
]
141144182 (VPS50)
Membrane trafficking [BR:
acat04131
]
Protein recycling
Others
EARP complex
141144182 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DcpS_C
Motif
Other DBs
NCBI-GeneID:
141144182
NCBI-ProteinID:
XP_073485705
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All DBs
Position
LG05:complement(37803500..38194465)
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AA seq
962 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQDSVHDLSPVENFRLPSKEEQREFREQAIDPEAEQEIINSIEEV
YFSSDSLDIVQYELEKLPPVLSLQEIEEYRDKLKRQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTSLQLAAVICSNGRRHLNTAKEGFTEASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISDLNSKLQDTLEQIEEQLDVA
LSKICKNFDVAHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLPYKDLCMHITSDSYIPCLTDLCKALWEVMLSYFCTMQWHEKNDQEEPQAASDS
ISANEENNFDRSYVKKKLEHGLTRIWQDVQLKVKTYLLGTDMSNFKYDDFIVVLDIISRL
MQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSSFSIIQ
LHEFKCLNQSRSPSMSPSKQVSATDSTTMSLFDQYISEGNPFEIQSSMKEDETEDVLTSN
GYESDELEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPSKSVSRETLRSRKRSDYSLNKM
NAPILTNTTLNVIRLVGRYMQMMTILKPIAFDVIHCMSQLFDYYLYAVYTFFGRNDAYES
TGLGLSSSRLRTTLNRIQESLIDLEVSGENSGSLAPSEERKEKVPSPHLSQLVILTSSNT
LYGLAQRVVATESLVFLAEQFESLQAHLDSVMPSAKKPFLQQFYSQTVSTASELRKPIYW
IVAAKAIDYEQLLVLMANVKWDVKEIMSQHNVYVDALLKEFEQFNKKLAELSKHVRIPLP
VSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDYQQFLMKLEKLTDIRPIPDKEF
VETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDMDRP
KR
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctctgatgacccgccagggtctcaaaagtccacaagacagcgtc
catgatctcagtccggttgaaaactttagacttccgtccaaggaggagcagcgggaattt
cgtgaacaggccattgatcctgaagctgaacaggagatcatcaacagcatcgaagaagtc
tacttctccagtgactcgctagatatagtccaatatgagctcgagaagcttccaccagtc
ttgagtctgcaggagattgaggagtacagagataagttaaagagacaacaggcagcggtg
tcaaagaaagtcgctgatctgattctagagaaacaaccctcgtatgtgaaggagctggag
cgagttacatctctacagacgagtcttcaacttgctgctgttatatgttctaatggaagg
agacacttaaatacggcaaaggaaggattcacagaagccagtctaggacttctggcaaac
cagcggaaacgtcagctattgattggcctgctaaagtctctgagaacaattaaaaccctg
caaagaaccgatgtacgcctcagtgagatgctggaggaagaagattaccccggagccatt
caactgtgtctggagtgtcagaaagcagcaagtacttttaaacactacagctgtataagt
gacctgaattcaaaactgcaagacactttggaacaaattgaggaacaattggatgttgcg
ctgtctaagatctgcaagaactttgatgttgctcattacacaaaggtgcagcaggcgtac
agactgctggggaaaacgcagactgcaatggaccagctgcacatgcacttcacacaagcc
atccacaacaccgtgtttcaggtggttctgggatacgtggagctgtgtgccggaaatacg
gataccaagtttcagaaactgccctacaaagacctctgcatgcacataacatccgatagc
tacatcccgtgtttgactgacctctgcaaggcactgtgggaagtcatgctaagttacttt
tgtacaatgcaatggcatgagaagaatgatcaggaggaacctcaggctgcttctgatagt
atctctgcaaatgaagaaaataactttgatcgaagctatgttaaaaagaagctagaacat
ggattaacgcgcatatggcaggatgttcagctgaaagtaaaaacataccttcttggaacg
gatatgtccaacttcaaatatgatgacttcattgtggtcctggatataattagcagacta
atgcaggtgggagaagagttttgtggcagcaagtcggaagtcttacaggaatccataagg
aagcaaagtgtcaactattttaaaaactatcacagaacgcggcttgaggagctccgaatg
ttcctcgaaaatgaaacatgggagctgtgcccagtcaagtccagtttcagcattatacag
ttacatgaatttaagtgtttgaatcagtctcgttccccgtcgatgtcaccgagtaaacaa
gtgtctgcgaccgactctactacaatgtcattgtttgatcagtatattagtgaaggcaat
ccttttgagatacaatcttctatgaaggaagatgaaacggaggatgtgctgacatccaat
gggtatgaatctgatgagctggaaaaaagtgcttatcaggagtacgacagtgacagcgac
gttccggaggagctcaagcgggattatgtggatgagcagaccggggatgcgccatcaaag
agtgtttcgagagagaccctgcgcagcagaaagcgatccgattacagcctgaacaagatg
aatgcgcccatccttaccaacacaacgctcaatgtaataaggcttgttggaaggtatatg
cagatgatgactatattgaaacctatcgcctttgatgtgattcactgcatgtcgcagctg
tttgattactacctgtacgccgtctatacgtttttcggaagaaatgacgcatatgaatcc
actgggctcggtctaagcagcagtcggctcagaacaacattgaacagaatccaggaaagt
ctcattgatttggaagtgtctggggaaaattctggatctctggcgccatctgaagaaaga
aaagagaaagttccgagtccacatctcagccaattggttattctgacgtctagcaatact
ctgtatgggctcgcccaaagagtggtggctacagagtccctggtcttcttggcggagcag
tttgaatctctgcaggctcatctggactctgtgatgccgtctgctaaaaagccttttctg
cagcagttctattctcagaccgtgtccaccgccagcgagctccgcaagccaatttactgg
atcgtagcggcgaaggctattgattacgagcaattacttgtgcttatggcgaacgtgaaa
tgggatgtaaaggaaatcatgtcacagcacaatgtatatgttgatgctttattgaaggaa
ttcgaacagtttaacaagaaattggctgagctgtcaaagcacgtccgtatacctttgcct
gtgtcgaatatcctctgggaacattgtatacgactcgccaacaggacgcttgtggaaggg
tacgccaatgtgaagaagtgcagcaatgaagggcgagctctgatgcagttggattatcag
cagttcctgatgaagctggagaagctaacagatatccggcccattcctgataaggagttt
gtggaaacttacattaaggcttattacctgactgagaacgacatggagcgatggatcaag
gagcacagagaatactccacgaagcagctaaccaacttggtgaatgtatgccttggttcc
cacatcaataaaaaggccagacagaagctcctggcagctattgatgacatggaccgacca
aaaagataa
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