Aquarana catesbeiana (American bullfrog): 141145098
Help
Entry
141145098 CDS
T11018
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03013
Nucleocytoplasmic transport
acat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141145098 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
141145098 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141145098 (THOC1)
03041 Spliceosome [BR:
acat03041
]
141145098 (THOC1)
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
141145098 (THOC1)
Spliceosome [BR:
acat03041
]
Complex C
Other components
EJC/TREX
141145098 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
141145098 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
141145098
NCBI-ProteinID:
XP_073487543
LinkDB
All DBs
Position
LG05:473253508..473307935
Genome browser
AA seq
661 aa
AA seq
DB search
MSPLLFSLQEARSKFMNATREAVASKNTKQLLTAFSQVAGSENEKKLTLDQVFRGVLEEE
IINQASCDNCLAIISLAINGVTEGICTATTPFVLLGDVLDCLPLDHCDRIFTFVEKNVGT
WKANTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFN
LENVTVFNVNESESTLGQKQVEDRDDGMEIEEGEMGDDEVPNNSSSIPIDYNLYRKFWSL
QDFFRNPVQCYDKSSWKTFLKFSEEVLAVFKSYKLDDTQASRKKIEELKSGGEHVYFAKF
LTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLLDEQSLWIEDTTKNVH
QLLRETPPDGEKFSKMVEHILNTEENWNSWKNEGCPSFVKERQQDNKPQKVARKRPAPED
FLGKGSNKKLLMGNDELTRLWNLCPDNIEACKLESREFMPTLEQFFEEAIEQADPENMVE
NEYKVVNNSNYGWRALRLLARRSPHFFQPTNQQFRSLPEYLENMVIKLAKELPPPSEEIK
TGEDEDEDDEDNESLLKENNESPEVQQQNPVSGELIEALANKLGEHWKTLAPYLEIKDSD
MKVIESDSEDVKMRAKLLLIAWQDREGARATTENLISALNQAHLNELAETLASDAENCTQ
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgctgttgttcagcctgcaggaggcgagaagtaaatttatgaatgctaccaga
gaagctgtggctagcaagaacaccaagcaattgttgactgcgtttagccaggtggctgga
agtgaaaatgagaaaaagctgacacttgaccaagttttcagaggtgttttggaggaggaa
attattaaccaagcatcttgtgacaactgtcttgcgattatttctcttgccatcaatggc
gttacagaaggtatttgtacagctaccacaccttttgtgctcttgggagatgtccttgac
tgtcttcctctggaccactgcgatagaatctttacatttgttgagaaaaatgttggaaca
tggaaagccaatacattttattcagctggcaaaaactatttgctaaggatgtgcaatgac
cttttgaggagactctccaagtcacagaacacagtgttttgcgggaggattcagctgttc
ctcgcccgcctatttccactttcggaaaaatcaggtttgaatttgcagagtcagtttaac
ctggagaatgtcaccgtgttcaatgtcaatgagagcgagagcactctgggacaaaaacaa
gtggaggatagggatgatggaatggagattgaggaaggtgaaatgggagatgatgaagtc
ccaaacaacagttcgtcaattcccatagattacaacctatataggaagttttggtcgctg
caggactttttcaggaatccagtacagtgctatgacaagagttcctggaagacatttctt
aagttttcggaggaggttcttgcagtgtttaagagttacaagctggacgatactcaggca
tcacgaaaaaaaattgaagagctgaaatcgggaggtgaacatgtgtactttgctaagttc
ctgacaagtgaaaagttaatggatttacagttgagtgacagcaacttccgccgacatatc
ttgttgcagtaccttatattgttccagtacttaaaaggccaagtaaagtttaagagctct
aattatgtgctgctagatgagcagtctctttggattgaagataccaccaaaaacgttcat
cagttactgcgtgagactccccctgatggagagaagttttcaaaaatggtggagcatata
ctaaacacagaagaaaactggaattcttggaaaaatgaaggctgtccaagttttgtgaaa
gagagacagcaagacaacaaaccacagaaagtagcaagaaaacgtccagcccctgaggac
tttctgggcaaaggttctaataaaaagctcctaatgggaaatgatgaattaacccggctg
tggaatctttgtccagacaacatagaggcatgcaagttagaaagcagagagtttatgcca
acgttggaacagttttttgaagaggccattgaacaagcagatcctgaaaacatggtggaa
aacgaatataaggtagtgaacaactcaaattatgggtggcgggcgttgagactattggct
cgtagaagtcctcactttttccaacctaccaaccagcagtttaggagtttaccagaatat
ctggagaatatggtgatcaagttagccaaggaattgccacccccatcagaggaaataaaa
acaggagaggatgaagatgaggatgatgaagacaatgaatctttattaaaggaaaacaat
gaaagtccagaagtccagcaacagaatccagtctctggtgagctgatagaagcacttgcc
aacaagcttggagagcactggaaaacactggccccttacttagaaataaaagactcggac
atgaaggttattgaatcggacagtgaagacgtgaaaatgagggcaaaattgttacttatt
gcttggcaagatcgagaaggcgctcgtgccaccactgagaatcttatttcagctttgaat
caggctcatttaaatgaactggcagaaaccttagccagtgacgcagaaaattgcacacaa
atctag
DBGET
integrated database retrieval system
