Aquarana catesbeiana (American bullfrog): 141145474
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Entry
141145474 CDS
T11018
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
acat00535
]
141145474 (COL14A1)
Proteoglycans [BR:
acat00535
]
Extracellular matrix (ECM) proteoglycans
Others
141145474 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
vWA_SIBA-E
VWA_3
Fn3_VIN3
Copine
Motif
Other DBs
NCBI-GeneID:
141145474
NCBI-ProteinID:
XP_073488307
LinkDB
All DBs
Position
LG05:complement(606203786..606490162)
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AA seq
1769 aa
AA seq
DB search
MKGQHNLHTMIVLSLLAVTVFLSNLGQSQVTPPTKLRFHVVSQDSVQISWKATKDKIRGY
KLLVTPKSGGKTNQLNLKNNATRAIIQRLDPDRSYKVQIIAFNEDDDSKPVLGEFRIRDL
EKKRKTKKIETSESENQVMEEDSKFSCKSPANADIVILVDGSWSIGRVNFRLVRSFIESL
VGAFNVATDKTRIGLAQYSGDPRIEWNLNTYDTKDSVLDAVRNLPYKGGNTLTGLALTFI
LENSFKPEAGARPDLPKIGILITDGKSQDDVIPPAKSLRDAGIELFAIGVKNADLNELKE
IASEPHTDHVYNVADFNIMDTIVESLTKTVCERVEDIDINIKGEVTEEVGSPSDLVTSEV
TARSFRVSWSHAPGNVEKYRVVYYPTKGGQPEEVIVDGSVSTTVLKNLMSLTEYQIAVFA
VYSRSSTDGLRGSETTLALPMATDLDLYDVTHRSMRAKWDGVAGATGYMILYAPLTEGLS
ADEKEMKVPASITDVELDELTPSTEYTVTVYAMFGEEASDPLTGQETTLPLTPPRDLRFS
NIEHSSATVSWDHSHKNVNGYRIMYVKTGDSDMNNVEVGRISSYNLKKLASLTEYTVAIF
SVFDEGQSEPLTGTFTTKPVPSPRDLKVRDITSNSFVAYWTHFAPDITTYRLQWTPRRGG
TTQEAIIKGNINSYLIDRLTHSTEYEVSLSAMFEDESESDTLSALATTLMRTTQAPTTAR
PTTAAVRFGIRNLKIDDETTSSLHVSWLMNDANVREYIVSYITAYGDREEQKVVAGREND
IVLQSLLSDTEYKVTVTPMYFNGEGNPVSASGRTLPLSAPRNLRVSDEWYNKLRITWDPP
PSSTMGYRIVYRPTSGTGPALEAFVGDDVNTILILNLLSGTEYNLKVLASYSTGFSDALT
GVGKTLYLGVTNLSAYQVKMTSICSQWQLHRHATSYRIIIESLQDGSKQEAVLASGTSRH
CFYELMPNSRYRITMYAQMQEAEGPGVSIVETTLPVPTAAPTRPPTPPPTIPAAREVCKS
ARADLVFLVDGSWSIGDDNFHKVTRFLYNTAGAMADIGPEGTQVGVAQYSDDARTEFKLN
SHKNKASLLAAINAISYKGGNTKTGRAIKHVREDIFTVESGMRKGVPRVLVVITDGRSQD
ETVTFANQMHLEGFSIFAIGVADADYSELVNIGSKPSERHVFFVDDFDMFKKIEDELVTF
ICETASATCPWAYIQGNSVSGFKMMEMFGLVQKEYAGLDGVSMEPGTFNNFPCYRIHKDA
LVSQPTKHIHPEGLPSDYTISFLFRILPDTPKEPFALWEILNKDYEPLVGVILDNNGKTL
TYFNYDNKAQFQTITFEGPEVRKIFHGSFHKIHIIVTKTNAKLIIDCKQVAEKPINTAGN
ITVDGLEVLGRMVRSRGPKDNSAPFQLQMFDIVCASSWANRDKCCELPALRDEATCPPLP
NSCSCEQENKGLPGPPGPPGGGGMRGQKGSQGDTGPPGSDGPPGPSGPPGVQGPPGPQGP
SGHSIQGPPGSPGSKGDKGEAGMQGNQGVPGTTGSPGMEGPAGQRGVPGKDGSPGPSGPP
GPMGAPGNPGSPGSPGSTGRQGDSGPPGSPGVKGERGERGDTQSQNMVRAIARQVCEQII
QSHMARFNSLLNQVPSQSVSVRSIPGPPGQPGKQGPQGPPGEQGSSGRPGFPGSPGSPGA
PGERGLTGEKGERGNSGVGTQGPRGPPGPPGSPGEGRTGSQGPVGVPGQRGLPGPPGNTG
SMGPPGPQGYCDAASCAGYGLIPYNDYER
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atgaagggacaacacaacctacacaccatgatcgttctgtcactattagcggtcaccgtt
tttttatccaatctggggcagagtcaagtgacgccgcctacaaaattaagattccatgtt
gtgtcacaagacagtgtacagatttcatggaaagcaaccaaagataaaattagaggatat
aaactccttgtgacgccaaaatcaggtgggaaaaccaaccaactaaaccttaaaaacaac
gctaccagagctatcattcaaagacttgatcctgatcggagttacaaagtacagatcatt
gcctttaatgaagacgatgacagcaagccagttcttggagagttcagaattagagatttg
gaaaagaagagaaaaactaaaaaaattgaaacatcagaaagtgagaaccaagtcatggag
gaagactcaaagttttcatgtaagtccccagccaatgcagatattgtaatcctggtcgat
ggatcctggagtattggaagagttaattttagacttgtgagaagcttcatagagagtttg
gttggagcttttaatgttgctacagataaaacaagaatagggttggcacagtacagcggt
gaccccagaatagaatggaatctaaatacatatgacaccaaggattccgtacttgatgct
gtccgaaacctgccttacaaaggtggaaacacgcttacaggtcttgccttgacattcatt
ctggaaaacagttttaagccagaagcaggagccagaccggatcttccaaagatcggtatc
ttgattacagatggaaaatcacaagatgatgttatcccacctgccaaaagtctgagggat
gctgggattgaactttttgctattggtgtgaaaaatgctgaccttaatgaattgaaggag
atagcgtcagaaccacacaccgaccatgtttacaatgtagctgacttcaacatcatggac
accattgttgaatcacttacaaaaactgtgtgcgagagagtggaagatatcgacattaat
attaaaggggaggtaactgaagaggttggatctccctctgacttggtcacatcggaagta
acggccagaagtttccgggttagctggtctcatgcaccaggaaatgtggaaaaatacaga
gtagtctattatcccaccaaaggaggacaaccagaagaggtgatagtggatggcagtgtg
tctactacagttctgaagaacctaatgtctctaacagaataccagatagccgtgtttgct
gtttactccaggtcttcaacagatggactgcgaggctctgaaaccaccctggcattgcca
atggccaccgatcttgatttgtatgatgtcacccaccgaagcatgagagcaaaatgggac
ggagttgcaggagctactggttacatgatcctgtacgcacctcttactgagggattaagt
gcagatgagaaagagatgaaggttcctgcatccattactgatgttgagctggatgaactg
actcccagtacagaatacacagtgacagtctatgcaatgtttggagaagaggccagtgat
ccactcacaggacaggaaacaacattgccattaactcctcccagagacctccgattttca
aacattgagcacagctcagccaccgtctcctgggaccactcgcacaagaatgttaatggt
taccggattatgtacgtgaaaacgggcgattcagacatgaacaatgtggaagttggtcga
atttcatcctacaatttaaagaaactggcatcgctcacagagtacacggtggccatcttc
tctgtttttgatgaaggacaatctgagcccctcacaggcacttttactacaaagccggtg
ccatctcctcgtgatctgaaagtcagggatatcacctcgaatagttttgtggcttattgg
acacattttgcgccagatataactacgtacaggctgcagtggacaccccggagaggcggc
accacccaagaggctataattaaagggaacatcaactcctatcttattgaccgcttgaca
catagcacagagtatgaagtctctctatcagccatgtttgaggatgaatcggaaagtgat
actctgtcagccttggctactacattgatgcggaccactcaggctccaactacagccaga
ccgacaacagcagctgtccgatttggaatcagaaacctcaaaatagatgatgaaacgaca
tctagtcttcatgtatcatggcttatgaatgatgctaacgttcgtgagtacattgtgtcc
tacatcactgcttatggagatcgtgaagaacagaaagtcgtagcaggtcgagaaaacgac
attgtgctccaatctctgctgtctgacactgagtacaaagtcacagtgactcctatgtac
ttcaatggagaagggaaccctgtgtctgcctctggaagaacactgccactctctgctcca
aggaacctgcgagtttctgatgaatggtataacaaactgaggataacatgggaccctcct
ccttcatcaaccatgggctacaggatagtgtacaggcctacaagcggcacaggtccggct
ctggaggcgtttgtgggcgatgatgtgaacaccatattgattctcaatcttctcagtggg
acagaatacaatcttaaggttctagcatcatattccaccggattcagcgatgcattgact
ggagtgggcaaaacattatatctaggagtgacaaatctgagtgcttatcaagtcaaaatg
accagtatctgttcccaatggcagcttcacagacatgcaacctcatacaggatcatcatc
gagtcactgcaggatggctccaagcaagaagctgtcctggctagtggaacatcccgtcac
tgtttctacgaacttatgcccaactccagatacaggatcactatgtatgcacagatgcag
gaggctgagggacccggcgtgagcattgtggaaacaacactgccagttccaacagcagcg
ccgaccagacctccaactcccccaccaaccattcctgcagcccgagaagtgtgtaagtct
gccagagcagacctcgtattcctggtggatggatcctggagtatcggagatgacaacttt
cacaaagtcactcgcttcctgtacaacacagctggagccatggctgacatcggccctgag
gggacacaggttggtgtcgctcagtacagtgatgatgcaaggacagaatttaagctgaac
tcccataaaaataaagcgtctcttctggctgccataaatgccatctcttacaaaggcggg
aacacaaaaacaggaagagcaattaagcacgtccgtgaagatatatttactgtggaatct
ggcatgagaaaaggtgtgcccagggttttggtggtgattactgatgggcgctctcaagat
gaaactgtgacgtttgccaaccagatgcatttggaaggcttcagcatttttgcgattggc
gtggcggatgcagactacagcgagttagtgaacattggcagcaagcccagcgagagacac
gtcttcttcgttgatgactttgacatgttcaagaaaatagaagatgagctggtcactttt
atttgcgagacggcgtcagcaacttgtccatgggcctacatccaaggcaacagtgtatca
ggtttcaaaatgatggaaatgtttgggttggtgcaaaaggaatatgccggcttggatgga
gtctccatggagcctggaacttttaataactttccatgctacagaatacacaaagacgct
ctggtgtcccagcccaccaaacatattcatccagagggcctcccgtcagattataccatc
tccttccttttccgaatacttcccgatacaccgaaggaaccatttgcactgtgggaaatc
ttaaacaaagactacgagccattggttggcgtaatacttgacaataacggtaaaacacta
acttatttcaattatgacaataaggcacagtttcagactattacctttgaaggacctgag
gtcagaaaaatattccatggcagctttcataagatacatattatagttaccaagactaat
gctaagctaatcattgactgcaaacaagttgcggaaaagccaataaacactgccggaaat
atcacagtagatggtctagaagtcctaggccggatggtaagatcccgaggacccaaagac
aattctgctccatttcagctgcagatgtttgacattgtgtgtgcatcatcctgggccaat
cgtgacaagtgctgcgaacttccggcattgagagatgaagccacctgtcctcctcttcca
aattcctgctcctgcgagcaagagaacaaaggattaccggggcccccaggacctccgggt
ggtggtggtatgaggggacaaaaaggatcacagggagataccgggccaccggggtcagac
ggcccgccaggcccatcaggcccaccaggagttcaaggaccacccggaccacagggacca
agtggacattccattcagggaccaccaggttctcctggttcaaaaggagataaaggagaa
gctggaatgcaaggaaatcagggagttcctggcacaacagggtctcctggaatggaagga
cctgcagggcaaaggggagtgccaggaaaagatggctcgcccggaccctccggaccccct
gggccaatgggtgcaccaggtaatccgggatctccaggctctccaggaagcacaggacgt
cagggtgatagcggaccaccggggtctcctggtgtaaaaggagaaagaggagaaagagga
gacacccagtcacagaacatggtgcgtgcaatcgctcgccaagtgtgtgaacaaatcata
cagagtcatatggcaaggtttaattcactcctgaaccaagtaccaagtcagtctgtatca
gtcagaagtatccctgggcccccaggacagccaggtaagcagggcccacaaggtccacct
ggagaacaaggatcttctggaagaccaggattccctggcagccctggctcacctggagca
cctggagaaagaggtttaactggtgaaaagggagagagaggaaactctggagtaggaaca
caaggacccaggggtcccccgggacctccaggatccccaggtgaaggtcgtactggaagc
caaggtccagttggtgttcctggccagcgtggcctcccaggtcctccaggaaataccggt
tctatggggcctcctggtcctcaaggttattgtgatgctgcctcgtgtgctggatatggc
ttaataccttacaatgactacgaacgttga
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integrated database retrieval system
