Aquarana catesbeiana (American bullfrog): 141146703
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Entry
141146703 CDS
T11018
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acat03400
]
141146703 (PMS1)
DNA repair and recombination proteins [BR:
acat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
141146703 (PMS1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HATPase_c
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
141146703
NCBI-ProteinID:
XP_073489290
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Position
LG06:251159641..251315520
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AA seq
888 aa
AA seq
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MHHLPLETIRLLSSSQVITSVVSVVKELVENALDANANSIEIKLENFGFDKIEVQDNGDG
IKAADAPVMGIKHYTSKITIHEDLEALETYGFRGEALGSICSVAEVHITTKTAADEISTQ
YVLGNSGHVVSQKPSHLGQGTTVTVLHLFKNLPVRKQYFSTTKKCKAELKKVQDLLMAYG
IIKPGLRIVLVHNKMVVWQKNKVLDHKMALMSLLGTTVMNSMVPFQHQDESEQIRIHGFL
PKREADSSATSSSSSERCFIFINQRPVYHKEILKMVRSYYSEHTTSRSYPVFFMNIVVPA
SFVDVNLTPDKTQVMLQNKESVLSAVEITLKSVYSDPVLKEVDRVNAQFTEADVNIKDPS
KANDGKDVIVETTDPLEQNAYTHLNNNDGKLESETEALLTDPSAESGIWPNNNRQQHSST
EHVKDDEADREFECNTAGKPTEYKNTISNNSLETSNDNWSKGTAFKNSKGENLQPVTILC
SSSETNTNQSCEETGLIEGPKNTEKKSTNVISEKSGFITAFDLMSNRVIKKPMSARDIFT
QEYRISYLKDTPKVGFDDLSTEMLDLWEQLGEEEKLKYEEKATKDLQRYRQQTAKATEKN
MQKPKEAEKRPRQVSGESTAQKIKRKTALSNQQILDTLFKSQVEKKASVPAVKTIQIAFS
LNSLKQKNRRLPGKEVQDTEFSLINKLNFPGAWVLASKRTITLLNPYRMEEMLLYKRLVD
NYKIPVEILDSPIVLTHRLVGETDYLSILLGMQKDYPKPNGHIYFSDPRLASNGFLIKMI
PGSPDSHVEIEGMTSILPFYGISDLKEILNFVMQKNTRELCDCRPLKVLNYLEGEAVRLA
RQLPLTLAKDDVYDTLSRMKKQFGDQTKGCIHGRPFYSHLADIPQDDE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacttgccgttggaaaccatccgattactatccagctcccaggtgattacttct
gtggtcagtgtggttaaggagcttgtggagaatgccttggatgctaatgctaacagcatt
gaaataaaattagagaactttggatttgacaagatcgaggttcaggacaatggggatgga
attaaagcagcagatgctcctgttatgggcatcaaacactacacctccaaaattactatc
catgaagacttggaagctttggagacctatggatttcgtggggaagctttgggttcaatc
tgctctgtagcagaggtgcatatcacaacaaagactgctgccgatgagattagcacccag
tatgttttgggtaacagtggacatgttgtatctcagaagccatcacaccttggacaggga
actacagtcacagtcttacatttattcaagaatttgccagtaagaaaacaatatttttcc
accaccaagaaatgtaaagcagagctcaaaaaagttcaagaccttctaatggcatatgga
attattaaaccaggccttaggattgtgcttgtacacaataagatggttgtatggcagaag
aacaaagtattagatcacaaaatggcactaatgtcacttttggggacaacagtcatgaac
agtatggttcctttccaacaccaagatgagtcagagcagatcagaattcatgggtttctt
ccaaagcgagaagcagacagcagtgcgactagttcttcaagttcagaaaggtgttttatt
ttcatcaaccagcgaccagtttatcacaaggaaatattgaagatggttcgatcatactat
agcgaacatacaacttctcgttcctatcctgtgtttttcatgaatattgttgtcccggct
tcatttgtagatgtcaatctaactcctgataaaactcaagtaatgttacagaataaggaa
tccgtgctcagtgctgttgagattacgctgaagtctgtgtactccgatccagtactcaaa
gaagttgaccgtgtcaatgcacagtttacagaagctgatgtaaacattaaagatccttca
aaagcaaatgatggcaaagatgtgattgttgaaactactgatcctttggaacagaatgcg
tatacacatttaaataataatgatgggaaactggaaagtgagacagaagcccttttaaca
gatccatcagcagaaagtggtatttggcctaacaataacagacagcagcattccagcaca
gaacatgttaaagatgatgaagcggacagggaatttgaatgcaatactgctggaaaaccc
acagaatataagaacaccatatcaaataatagcctggaaacgtctaatgataattggagt
aaagggacagcttttaaaaattcaaaaggagaaaacctacaacctgttacaatattgtgc
tcttcaagtgaaacaaacaccaaccaaagctgtgaagaaactggcttaatcgaggggccc
aaaaataccgaaaagaaatctacaaatgtaatctctgagaaatctgggttcataactgct
tttgatttgatgagtaacagggttataaagaaacccatgtctgcaagggatattttcacc
caagaataccgaattagttatcttaaggacacaccaaaagttggatttgatgacctttct
acagaaatgttggatctttgggaacaacttggtgaagaggaaaaacttaaatatgaggaa
aaagccaccaaggacctgcagcgatacaggcagcagactgcaaaagctacagaaaagaat
atgcaaaagccaaaagaggcagagaaaagaccaaggcaggtttcaggggaaagcactgct
caaaaaataaagcggaaaacggcactctccaatcaacaaatactggatactttgtttaag
tcacaagttgaaaagaaagcatcagtacctgctgttaaaactatccaaatagcttttagc
ctgaacagcctaaaacagaagaacagaaggcttccggggaaagaagtgcaggatacagaa
tttagcttaataaataaattgaattttcctggtgcttgggttttggcatctaagagaaca
ataacattgttgaatccttacagaatggaagaaatgttgttgtataaacgacttgtggac
aattataaaattcccgtagagattttggactctccaattgtattaacacataggttggtt
ggagaaactgattacctctcaattcttttaggaatgcaaaaggactatccaaaaccaaat
ggacatatttatttttcagaccctagactcgcctctaatgggtttctaattaaaatgata
ccaggttctccagatagccatgttgagattgaaggaatgaccagcattttgccattttat
ggaatctctgatctaaaggaaattctaaactttgtaatgcagaaaaatacaagagaactg
tgtgactgtagacctcttaaagttttaaattatttagagggtgaagctgtaagactggca
agacaactacctttaaccctagcaaaagatgatgtgtatgacacattgagtcgaatgaaa
aaacagtttggagatcaaactaaaggatgcatccacggtcgaccattttattctcacctg
gctgatattcctcaagatgatgagtag
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