Aquarana catesbeiana (American bullfrog): 141146917
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Entry
141146917 CDS
T11018
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04510
Focal adhesion
acat04512
ECM-receptor interaction
acat04518
Integrin signaling
acat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141146917 (COL6A2)
04518 Integrin signaling
141146917 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141146917 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141146917 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acat04147
]
141146917 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
acat00536
]
141146917 (COL6A2)
Exosome [BR:
acat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141146917 (COL6A2)
Glycosaminoglycan binding proteins [BR:
acat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141146917 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
141146917 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
141146917
NCBI-ProteinID:
XP_073489812
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All DBs
Position
LG06:complement(316792868..316867923)
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AA seq
1018 aa
AA seq
DB search
MAKLHVLCLLLATTFGSLWAQNGDQKSCADKTKCPVNVFFIIDTSESIILQTAPIQSLLE
HMKRFIPAFLDKLENAAYRDQILLNWVYGGLHYSDEVQIYSQLTADKTEYLSRLRGIQYI
GRGTFTDCAISNMTALIDAAIRAQASQGQDVVNFAVVITDGHVTGNPCGGVKAQVESAQS
KGIKLFSVAASRDVYESGLREIASQPYELFRNAYTVTNPNDQTEIDQSTIDKIIQVMKHE
AYGECYKLSCLEIAGPPGVDGQRGQKGAKGNAGEPGAVGPKGRQGDPGIEGPIGYPGPKG
VSGLKGEKGDFGTDGRKGSAGLAGRNGTDGQKGKAGRIGSPGCKGDPGDKGPNGYAGDAG
DRGDDGDPGPKGDAGRPGRNGPPGPFGEKGDKGLPGNSGAPGGPGIKGNKGGPGTAGPKG
EPGRRGDPGTKGGAGTDGPKGEKGDPGPEGPRGLGGEVGLKGAKGDRGAPGPRGAQGTVG
VPGKNGSRGDPGDMGERGNPGAPGPKGDRGRPGISYPGPRGSPGDKGDKGPPGPQGGRGD
FGQKGAPGPKGVKGEFGDKGSTGEPGPRGPTGESGGEGDIGPPGDPALTECDVMTYVRET
CGCCDCEKRCGALDIVFIIDSSESIGYTNFTLEKNFVINVVSRLGSFAKDPNSDIGARVG
VVQYSHEGTFEAIQLNDPRIDSLSSFKEAVRRLEWIAGGTWTPSALQFAYNTLIKETRRD
KAKVFAVVLTDGRHDPRDPDDGLNSLCGGDVTVNAIGIGDMFNKEDDAETLTSIACNQQQ
QIQKMKLFSELVADEFIDNMEERLCPDPQIVCPDLPCQSELAVAQCSQRPVDLVFILDSS
ERIGAQNFKQAASFVEEVSRQLSLSKKDDDTANARVALLQYGGKDEQAVAFTLTYNLTEI
SQGLSRLTYFDSSSNIGNAIIYAINKILQDKTRGARRFAETSFVLITDGVTGDEGLKEAV
SAMKKNNVVSTLVSVGTDLDMQVLKQLSLGESAAIFKEKEYARLTENAFLDRFVRWVC
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggccaagctccatgtgctgtgtttgctgcttgccaccacatttggctctctctgggca
cagaatggtgatcaaaaatcatgtgcagataaaaccaaatgtccagtcaatgtgttcttc
atcattgatacatccgaaagtataattctacagaccgctccaattcagagcttgctggag
catatgaagcgattcattccagccttcttggacaagctagagaatgctgcctaccgggac
cagatccttctgaactgggtgtatggtggtctgcattattcagatgaggtccaaatctac
agccaacttactgccgacaagactgaatatctttcacgactgcgtggaatccagtatatt
ggacggggcaccttcactgactgcgccatttctaatatgacagcactaattgatgctgca
ataagggctcaggctagccaaggtcaggatgtagtaaattttgcagtagtgatcacagat
ggtcatgtgactggaaatccatgtggaggagtgaaggcacaggtcgaatcagctcagtct
aaaggtatcaagctgttctctgtagctgcaagtcgtgatgtgtatgagtctggtctcagg
gagattgcaagccaaccctatgagctgttcaggaacgcatatacagtgaccaatcccaat
gaccaaactgagatcgatcagagtaccattgataaaatcattcaagttatgaaacacgaa
gcttatggagagtgctataaactgagctgcttggagattgcaggtccccctggtgtagat
ggacagagaggacaaaagggtgccaaaggaaatgctggtgaacctggagccgttggacca
aaaggacggcagggagaccctggaattgaaggaccaattggatatcccgggcccaagggt
gtttcagggttgaaaggtgaaaagggagattttggaacagatggaagaaagggatcagct
gggctggctggaagaaatggtacagatggacagaagggtaaagcgggtcgaattggttct
cctggctgtaagggagatcctggagataagggccctaatggctatgcaggagatgctgga
gacaggggagatgatggagaccctggaccaaagggtgatgctggaaggcctggacgtaat
ggaccaccagggccattcggagagaaaggagataagggtctgcctggaaattctggggct
cctggaggtccaggtataaaagggaataaaggaggacctgggacagcaggaccaaaagga
gagccaggtcgcagaggagatcctggtaccaaagggggtgcaggcactgatggacccaaa
ggagagaagggagatcctggtccagagggtccacgaggacttggtggagaagttggccta
aaaggagcaaagggtgatcgtggagctccaggaccaaggggagcgcagggaacagttgga
gtgcctggcaaaaatggctcacgtggagacccaggggacatgggagaaagaggaaacccg
ggagcaccaggacctaagggagacagaggaagacctggtatcagctacccaggaccacgg
ggatctccaggtgataaaggagacaaaggaccaccaggacctcagggaggacgtggcgac
tttggacaaaaaggagcccctggacccaaaggagtgaagggggaatttggtgacaaaggt
tccaccggagagcctggcccccgcggaccaactggggaatctggaggcgagggtgacatt
ggacctcctggtgaccctgccttgactgaatgtgatgtcatgacatacgtacgagagaca
tgtggatgctgtgactgtgaaaagcgctgtggtgctctggacattgtcttcattattgac
agctctgaaagtattggctacaccaactttactctggagaagaactttgtcattaatgtt
gtaagcagactaggatcctttgccaaagatccaaactctgacataggtgctcgagttggc
gttgtccagtacagtcatgagggtacatttgaggctattcaattgaatgatccccgcatt
gactctctgtccagctttaaggaggcagtgaggcgtctggaatggattgcgggaggaaca
tggaccccctctgctctgcagtttgcttataatacactaatcaaagaaacaagacgtgac
aaagccaaagtttttgcagtagtgctcactgatggtcgtcacgacccaagagaccctgat
gatggcctgaattcactgtgtggtggggacgtcacagtcaatgctattggcatcggtgac
atgttcaacaaagaggatgatgctgagaccctgacttccatcgcctgcaaccagcaacag
caaatccagaagatgaaacttttctctgaactggttgctgacgagttcatagacaacatg
gaggagcgactgtgcccagaccctcagattgtgtgtccagatctgccatgtcaatcagag
cttgccgttgctcagtgctcacagcgcccagtggatctcgtcttcattctggatagctct
gagaggattggagcacaaaacttcaaacaagcagcatcctttgtggaggaggtctcaaga
cagttgtcactatcaaagaaggatgatgacacagctaatgcccgtgtggcccttcttcag
tacggtggaaaagatgagcaggctgtggcattcactcttacctacaaccttactgagatt
tcccaaggtctttcacgtctcacttactttgactcatcctcaaacattggaaatgccata
atttatgccatcaacaaaatccttcaagataaaaccagaggagcacgacggtttgcagag
acctcttttgtcttaatcactgatggtgttactggtgatgaaggcctgaaggaagctgtt
tcagcaatgaagaagaataatgttgtctctactctggtctctgtgggaacagaccttgac
atgcaggttctaaagcagcttagtttaggtgagagtgcagccatttttaaagagaaggaa
tatgccaggctaactgaaaatgccttcttggacagatttgtgcgttgggtgtgctaa
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