Aquarana catesbeiana (American bullfrog): 141146996
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Entry
141146996 CDS
T11018
Symbol
DYNC1I2
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04145
Phagosome
acat04814
Motor proteins
acat05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
141146996 (DYNC1I2)
09142 Cell motility
04814 Motor proteins
141146996 (DYNC1I2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141146996 (DYNC1I2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acat03036
]
141146996 (DYNC1I2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
acat04812
]
141146996 (DYNC1I2)
Chromosome and associated proteins [BR:
acat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
141146996 (DYNC1I2)
Cytoskeleton proteins [BR:
acat04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
141146996 (DYNC1I2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
WDR55
Dynein_IC2
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
141146996
NCBI-ProteinID:
XP_073489999
LinkDB
All DBs
Position
LG06:complement(339579306..339780797)
Genome browser
AA seq
664 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEEKKKSQTEQKKEAAPPQEESDLEKKRREAE
ALLQSIGITADTPLAVQPLRIVTEDTCLFHYLVPPPTSPSSKSVSTPSEAGSQDSGDGTG
GASSRSAVTKKTLHWDTDPSVLQLHSDHELGRGPLKLGMAKITQVDFPPRETVTYTKETQ
TPILTQQNEGDEDEEETVTPKPAPVPEENKPTKKEENSEVTQVCNDLPAPPHELTEEEKQ
QIVHTEEFISFFDHSTRIVERALSEQINIFFDYSGRDLEEKEGEIQAGAKLSLNRQFFDE
RWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSA
VMSAAFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQN
AHNLISISTDGKICSWSLDMLSQPQDSMELVHKQSKAVAVTCMSFPVGDVNNFVVGSEEG
SVYTACRHGSKAGISEMFEGHQGPITGIHCHSAVGAVDFSHLFVTSSFDWTVKLWTTKNN
KPLYSFEDNADYVYDVMWSPTHPALFACVDGVGRLDLWNLNNDTEVPTASMNVEGNPALN
RVRWTHSGREIAVGDSEGQIFIYDVGEQIAVPRNDEWTRFARTLAEINANRADAEEEAAN
RIPG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataaaagtgaactgaaggcagaattggaacgaaagaaacagcggttggctcag
atcagggaggagaagaaaagaaaagaggaagagaagaaaaagagtcagactgaacagaag
aaagaggcagctcctccacaagaagaatctgacttggagaaaaagagaagagaagctgaa
gccttactgcaaagtataggaattaccgccgatacccctctggcggtccaacccctgcga
atagtaacagaagatacgtgtctgtttcactatttagtccctccacctacgtctccctcc
tctaagtctgtgagtacaccgagtgaggctggaagtcaggattctggagatggcaccgga
ggagcaagttccagaagtgcagttaccaagaagacactgcattgggacactgatccatca
gttcttcagctccactctgaccatgaactgggacgtggccccttgaagttgggcatggcc
aaaatcactcaagtggatttccctcctcgagaaacagtcacatacacaaaagaaacccag
actccaatcttgacccagcaaaacgaaggtgatgaagatgaagaggaaactgtaactcca
aagcccgcacctgttcctgaagagaacaaacccaccaagaaagaagaaaacagtgaagtt
acccaggtttgtaatgatcttccagccccaccacatgagctcacagaagaggagaaacaa
caaatcgttcacactgaggagttcatcagtttctttgaccacagcacaagaattgtggag
cgtgccctttctgaacagatcaacattttctttgattacagtggcagagatctagaagaa
aaagaaggagaaatacaagcaggtgcaaagttgtctctgaacagacagttttttgatgag
cgttggtcaaagcatcgtgttgttagctgcctggattggtcctctcagtaccccgagcta
cttgtagcatcctacaacaacaacgaggacgcccctcacgagccagatggcgtggcactc
gtatggaacatgaaatacaagaagacaaccccagaatatgtgtttcactgccagtctgct
gtaatgtctgcagcttttgcaaagtttcaccccaacctggtagttggtgggacgtattcc
ggccagattgtgttatgggacaacagaagtaacaagaggacaccagtccagaggactcca
ctttcagctgctgctcacactcacccggtctactgtgtaaatgtggttggcacacagaac
gctcacaatctgatcagtatatctacagacggaaagatctgttcttggagcttggatatg
ttgtctcaaccacaggacagcatggagctggttcacaagcaatcgaaggcagtcgctgtc
acctgtatgtccttccctgtgggagatgtcaacaactttgtagtgggaagtgaagaaggc
tcagtgtacacagcatgtcgccatggaagtaaagcaggaataagtgaaatgtttgaaggc
caccaaggaccaattacaggcatccactgccactctgccgtgggagccgtggacttttcc
cacttgtttgtcacatcttcctttgattggacagtgaagctctggacaacaaagaataat
aaacctttgtactcgtttgaagacaatgcagactacgtgtatgatgtcatgtggtctcct
actcatccagctttgtttgcttgtgtggacggtgtaggaagactggacctatggaacctc
aacaatgatacagaggtaccaacggccagcatgaatgtggaagggaacccggcccttaat
agggtcagatggactcactccgggagggagattgctgtaggagactctgaggggcaaatc
tttatatatgatgttggagagcaaattgctgtgccacggaatgacgaatggacccgcttt
gccaggacacttgctgaaatcaatgccaacagggctgatgccgaggaagaagctgcaaac
cgcattcctggttaa
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