Aquarana catesbeiana (American bullfrog): 141147081
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Entry
141147081 CDS
T11018
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141147081 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acat03041
]
141147081 (PRPF40A)
Spliceosome [BR:
acat03041
]
Complex A
U1 snRNP components
U1 related factors
141147081 (PRPF40A)
Complex B
141147081 (PRPF40A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
CEP164_N
Motif
Other DBs
NCBI-GeneID:
141147081
NCBI-ProteinID:
XP_073490241
LinkDB
All DBs
AA seq
934 aa
AA seq
DB search
MYPIRWMCPPLAALASGDGTNGPSQPGLFPNGSRMMRGQFMNPVAHFASMGMGGLPPRPN
LAPPGMIPPLMGPMGAHQMGQMAPMIPPLIPGMMMPAHVAPGTMPGSMQVPGVNSLDPTL
VQPPVTQAPHPVISAPPAISANPVANEEPTKPKSLWTEHKSPDGRTYYYNIETKQSTWEK
PDEMKTPAEQLLSKCPWKEFKSDSGKPYFYNSQTKESRWAKPKELEDLEAMIKEESSSSQ
ETVASTPVPAAPAPAPAPVQINAASVAVEVASTPTPTPTPAPVAVAAEAELTMSTPTTPA
LDSETMVNDSGEEQAHSVSSSIQEKDPEVCSSGIVEESATQEVLADSASIEEEEEKALKK
TYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALTKLSEKKQAFNAYKV
QTEKEEKEEARLKYKEAKEGYQRFLENHEKMTSTTRYKKAEQMFNELDVWNAISERDRLE
IYEDVLFYLSKKEKEQAKQLRKRNWEALKNILDNMANVTYCTTWSEAQQYLMDNPTFAED
EELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERRRQRKNRESFQVFLDELHEHGH
LHSMSSWMELYPTVSSDIRFANMLGQPGSTALDLFKFYVEGLKARYHDEKKIIKDILRDK
GFVVELRTSFEDFVMVISSTKRATTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRK
ESAFKSMLKQAAPPIEADSVWEEVRERFNKEAAFEDITLEAERKRIFRDFVHAIEHECMH
HHSKNKKHSKKSKKHHRKRSRSRSGSESEDEEENHTKKKTRQRSDSRSGSEHSSSGESEK
SYKKTKKHKKKSKKKRHKSNSPESEGERDRDRKDRDKDDKERPRQKESKQQKSPKRKSTK
EKDSGNWDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtatcctatccgctggatgtgtcctccgctggccgctctcgcatctggcgatggtaca
aatggaccaagtcagccgggactttttccaaatggatctcgcatgatgagagggcaattt
atgaaccccgttgcccattttgcaagcatgggaatgggtggcttacccccaagaccaaat
ctggcaccaccaggcatgatcccacctttgatgggaccaatgggtgctcatcaaatggga
cagatggctccaatgattcctcccctcattcctggaatgatgatgccagcgcatgtggca
ccgggtacgatgcctggcagcatgcaggtgccaggtgtgaacagcttggatcctacactt
gttcagccgccagtcacgcaggctccacatcctgtaatttcggcgcctccagccatttca
gcaaaccctgtcgctaacgaagagcccaccaagccaaaatctttgtggacagaacataaa
tcaccagatggtaggacatattattataatattgaaaccaagcagtctacgtgggagaaa
ccagatgaaatgaaaaccccagccgagcaattactatccaaatgtccctggaaggagttt
aaatctgactctggaaaaccatatttctacaattcccaaacaaaggaatctcgttgggcc
aaacctaaagagctcgaagatctggaagcaatgattaaagaagaaagcagcagttctcaa
gaaaccgtagcttccactcctgttcctgctgctccggctcctgctcctgcacctgtacaa
ataaacgcggcttcggtggctgtagaggtagcaagcacaccaacacctacacccacacct
gcacctgtggcagtggctgctgaagcagagcttaccatgtccacccccacaacacctgcc
ctagactctgagactatggtcaatgactctggtgaagaacaagcccattctgtgtcgtct
tccattcaagagaaggaccctgaagtctgcagcagcggcattgtagaggaatctgctaca
caagaggtcttagcagactcagcttcaattgaagaggaggaagaaaaggctcttaaaaag
acatatacatggaacacaaaggaagaagctaagcaagcatttaaggaactcctcaaagaa
aagcgtgtgccatctaatgcttcttgggaacaagctatgaagatgatcatcaatgatcca
agatatagcgcattgacaaagctaagtgagaagaaacaggcatttaatgcatacaaggtg
cagacagaaaaagaagagaaagaggaagccaggttgaaatacaaagaggctaaagaaggt
taccagaggtttctagaaaaccatgagaaaatgacctcaaccacccgatacaaaaaagca
gagcagatgttcaacgagctagatgtctggaatgcaatttctgaacgtgaccgtcttgaa
atttatgaagatgttttgttctatctttcaaagaaagaaaaggaacaagccaagcagctc
agaaagaggaactgggaagctttgaagaatatcttggataatatggcaaatgtaacctat
tgtacaacatggtcagaagcacagcagtacctcatggacaaccctacttttgctgaagat
gaggaactgcagaatatggataaagaagatgccttaatatgttttgaagagcatattcgg
gctttggaaaaggaagaggaggaagagaaacaaaaaactttgctaagggaaagacgtcga
cagaggaagaatcgagaatccttccaggtgtttttagatgaattacatgaacatggtcat
ttacactcgatgtcctcttggatggagttgtaccccacagtcagttctgacatccgattt
gccaacatgcttggtcagccaggttccacagcattagacctattcaaattctatgtggaa
ggtctgaaggctcgataccatgatgagaaaaagatcatcaaagatattttaagggataaa
ggttttgtagttgagctccgcacaagctttgaagattttgtcatggttattagctcgaca
aaaagagccaccacgttagatgctggaaatatcaaacttgctttcaacagtcttttagag
aaagctgaggcccgggagagagaacgtgagaaggaagaggcccggaaaatgaaaagaaag
gagtctgctttcaagagtatgttaaaacaagcagcaccacccattgaagcggactctgtg
tgggaagaggttcgagaaaggttcaataaggaggcggcatttgaagatatcacacttgaa
gcagaacggaaaaggatatttagagattttgttcatgccatagagcatgaatgtatgcat
catcattcgaaaaacaagaagcactcaaagaaatcaaagaaacatcatcggaagaggtct
cgctcgcgctctggctcggaatccgaggatgaagaggagaaccacacaaaaaagaagaca
aggcaaaggtcggactccaggtctggctctgaacattcctccagtggagaatcagaaaaa
agttataaaaagacaaagaagcacaaaaagaagagcaagaagaaaagacataaatctaat
tctccagaatctgaaggagagagggacagagatagaaaagacagagacaaggatgacaag
gaacgaccgaggcagaaagaatcaaaacagcagaaatctcctaaaaggaaatcaacaaaa
gagaaggattctggtaattgggacacatccggaagtgaattaagtgaaggggaattggaa
aagagaagacgaaccctcctggagcagctggatgatgatcaataa
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