Aquarana catesbeiana (American bullfrog): 141148786
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Entry
141148786 CDS
T11018
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03440
Homologous recombination
acat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141148786 (PALB2)
03460 Fanconi anemia pathway
141148786 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acat03400
]
141148786 (PALB2)
DNA repair and recombination proteins [BR:
acat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
141148786 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
141148786 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
141148786
NCBI-ProteinID:
XP_073492630
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All DBs
Position
LG06:complement(100436804..100480373)
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AA seq
1309 aa
AA seq
DB search
MENMQEKCFTLEDKAKLKERLALLKKEYKKTVNRLQKSERAERVKTYVKRTIEEQNRLLS
QEYTGQDSVLLSAGPENCTSNASGDFGESHKIFETPSADKERKPCVSFNLEPEIVNSDSR
TPSCSGGESSGQEAEGNRAHQSSQISRSRLRLSRTARRVCFSESPSPSVCRISSIVNVLD
KSLSPVFKKHPSDGAPLRPDNPAASYCSEDSKPKENSHEIAGPSSTTLLRLGTADNSPGE
VRSNFESLHSVDEIATPNEQLFVKNSFVKSETKEEQPLPTSQSLDVEVTCISSCGPLDTP
PRALEFENHTDLKRTSQVSPSFSSENQPPLNLKAHTESTVVKEDHNPLSSCTLVEGLLFP
VEYYVRTTRRMTSCQRKVDLEAVISSHLLTGRKGSRGRSRRNSTSLSTPVNQSDRLSNSL
TPSSHPSVSNSAGEGTRSRRGRGRKSCPAALSSGLKDVSVQLRFDAENSQALSGSQSEKE
NCEEAMASNESHGAVKCLTNIRDGSQIKEVDRFMTLLSDKKAYSLRSRDTVFNVSTSAGY
KDGKLYNFGSSKEASELTGSPFPVFSDRISLDRLSHYFKITDFHLPDEDFGILKLEKLKS
VNHLEPFTPHTPRNGRGCNQHPKIDSKTLPPTCSSAVLQEENLVACSQNLDRALNLLESS
ENCLNVDPTPCNKEGPLENNKKPSADAAEPSHSLISEPTSALPPVVPVLDSKDKISQSPK
KYFLLSPFPYDNNPRHISCIPERPLPDDEIPQNTLPMPSDSSSDGDIRTLIAVTEVSGDA
ESLWAKLDSQRIKESDDVPRDSPTQSKLSGTLASPKELNSSVLFSTSLCSVPQENMNDFV
SSSCTPGLPFLGSTPAIFSSLQGSNTSVGCSPGDEGQEKVLLPEVCGGEGREFMSLSCIS
ATGDTEDTKQCHDVLGQDNTTVVESHCEYLEHQENSLLSKTDKDRSVHVISENADNEDTA
VETGSGVHLHLLSEVKDSCGGGCAVDLCSVWWEFSGSPELCIVAASESSVCLWRPQTEGN
WYCAHSWCFKEMPVIQILPLSQEKNIVCVALGNLETMEIWALFSPPKTLGWKKQLVKRGH
MKTAQGLSRHRLVSSGSGEHDQVVEVQQLSETGSTVQFISLVPPKDSVVAFCEVEGERDA
LVGSTMDTYVVVWNAVTGHLLSTIRVGDHCSDLTCLSATSDSGLLFLVVASLFSKPCEDA
GSCIFKLIAANPREGTSTPIISYVIPDKPSRRYLEGDVKRQKAAAVLTCGSIALWDLSRS
HCSVTLPPSLAAPWCLVRWSHIPCCLLTGKKDGTICIYEYTEHCSDKER
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacatgcaagagaaatgcttcacactggaagacaaagcaaagcttaaggaaagg
cttgccttgctgaaaaaagaatacaaaaaaacggttaatcgtttacagaaatctgagaga
gctgaaagggtgaagacttatgtcaagagaaccattgaagaacagaaccgactgctgagt
caggaatacactgggcaggatagtgtgctgctgtcagcaggcccagaaaactgtaccagc
aatgcttcaggagactttggggaatcgcacaaaatttttgaaaccccttcagcagacaag
gagagaaagccatgcgtctcctttaatttggagcctgaaattgtcaacagtgacagcagg
accccttcttgctctggcggtgagagcagtgggcaggaagctgaaggaaacagagctcat
caatctagccaaatttccagaagtcggctgaggttaagccgaacagcaagaagagtttgt
ttttctgaatcgccgtccccgagtgtatgtcgtatcagcagtattgttaatgtcctagat
aaaagcctgtcgccagtgtttaagaagcatccttcagatggtgctcctctgagaccagac
aatcccgctgctagctattgttcagaggattcaaagcctaaagaaaattcacatgagatt
gctggtccttctagtaccacgttgctccgactggggacagcagataactcaccgggtgaa
gttaggagtaattttgaatctctgcattcagttgatgaaatcgctacacctaatgaacaa
ctttttgtgaaaaactcattcgttaagtcagaaaccaaagaggagcaaccactacccaca
tcacaatctttagatgtagaagtgacatgcatttcctcttgtggccctttggacacacca
ccacgagcacttgaatttgaaaatcacacagatctgaagagaacttctcaggtcagtcct
tccttctcttctgaaaaccagcctccactaaaccttaaagcccacactgaaagtaccgtg
gtcaaggaggaccataacccgctcagttcctgcaccctggtggaggggctgttattccca
gtagaatattatgtcaggacaacacgccgcatgaccagctgccagaggaaagttgatctt
gaagcagtgataagcagccaccttctcacaggaaggaaaggatcaagaggaaggtcacgg
cgaaacagcacatctttatccacaccagttaaccagagtgatagactttctaattccctg
actccttcaagccatccttctgtaagtaacagtgctggagagggtacacgatccaggcgt
ggaaggggtcgaaagtcctgtcctgctgcactctcctcaggtctaaaagatgtatctgta
cagcttaggtttgatgctgaaaacagccaagcattgagtggctcgcagagtgagaaagaa
aactgtgaggaggccatggcaagcaacgagtcacatggtgctgtgaagtgtcttactaat
ataagggatggttcccagataaaagaagtggacagatttatgacattgctgtctgataag
aaggcatacagtcttagatctcgggacactgttttcaatgtaagcacatcagctggctat
aaagatggaaagctttataattttggaagctcaaaggaagccagtgaactgacaggctct
ccattccctgtctttagtgacaggatcagtctggatcgtctgtctcactactttaaaatt
acagacttccatctgccagatgaggactttggcattctgaagcttgaaaagctaaaatcg
gtgaatcacctggagccattcacaccacatacacccagaaatggaagagggtgcaaccag
catcctaagattgacagtaaaacattgccccctacatgtagctccgcagtgctgcaggaa
gaaaatctagtggcttgttctcaaaatttagacagagccctaaatctattagaaagtagt
gaaaactgtttgaatgttgatccaactccttgcaacaaagaaggccctttggaaaataat
aaaaagccatcagcagatgcagcagaaccatcacactctcttataagtgagccaacaagt
gctctaccacctgttgtcccggttttagactccaaagacaaaatatctcaatctcctaaa
aaatacttcttattaagcccatttccttatgataacaatcctaggcacatcagctgtatt
ccggaaagaccccttcctgatgatgaaataccccaaaacactttgccaatgccctctgac
tcctcgagtgatggtgacatacgaacgctaattgcagttactgaagtttcaggagatgct
gagagtttatgggcgaagcttgactcccaaagaattaaagaatctgatgatgttcccaga
gattctcctacacagtcaaagttatctggaacacttgcttctccaaaagaattgaacagt
agcgtcctcttctcaacatcgttatgctctgtccctcaagagaatatgaatgattttgtg
tcttcgtcctgcacaccagggcttccttttttaggttcaactccggccatcttttcttct
ctgcaaggcagcaatacatctgttggttgcagtccgggagatgaggggcaagagaaagtc
cttctaccagaggtctgtggtggagaaggccgtgagtttatgtcgttgagttgtataagt
gctactggagatacagaagacactaagcaatgtcatgatgtattgggacaagataacacc
acggtggttgaaagtcattgtgaatatctagagcatcaagagaatagcctattatcaaag
actgacaaagatagatctgttcatgttatatcagaaaacgctgataatgaagatacagcg
gtagagactggatcaggagttcatctacatctgctttcagaagttaaggacagctgtggt
ggtggttgtgcagtagatctgtgctctgtttggtgggaattctctggaagtccagagctc
tgcattgtagcagcgagtgaatcctctgtttgcctttggagacctcagacagaagggaat
tggtactgtgctcacagttggtgctttaaagagatgcctgtcatccagatacttccgtta
tctcaagagaagaatattgtttgtgttgctttaggaaatctagaaaccatggagatctgg
gctctattctcaccccctaaaacacttggttggaaaaagcagctggtcaaacgtgggcac
atgaagactgctcagggattgtcgaggcaccgtctggtcagcagtggcagtggagaacac
gaccaagtggtggaagtgcagcagctgtcagagacaggaagtacagtgcaattcatttca
ttggtgccccccaaagacagtgttgtggccttctgtgaagtggaaggagagagggatgct
ttggttggatccaccatggatacgtatgtggttgtctggaatgctgtcactggacacctc
ttgagtacgatccgtgtgggtgaccactgctctgacctcacctgtctcagcgcaacctcc
gactctggtttgttgtttttggttgtcgccagtctattcagcaaaccatgtgaggatgca
ggaagttgcatattcaagctgattgccgctaatccacgagaagggaccagcactcccatt
atatcttatgtaattccggacaaacctagtagaagatatctggaaggggatgttaaaaga
caaaaagcagctgcagtattgacctgtggaagcatagcactctgggatttatccagaagc
cattgcagcgttacacttccccccagcttagctgcaccctggtgtcttgtacgatggagc
cacattccttgctgcctgctgactggaaaaaaagatggaaccatatgcatttatgagtat
acagaacactgctccgataaggaaagatga
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