Actinoalloteichus caeruleus: ACOJVX_05545
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Entry
ACOJVX_05545 CDS
T11237
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
acau Actinoalloteichus caeruleus
Pathway
acau03030
DNA replication
acau03430
Mismatch repair
acau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACOJVX_05545
03430 Mismatch repair
ACOJVX_05545
03440 Homologous recombination
ACOJVX_05545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acau03032
]
ACOJVX_05545
03400 DNA repair and recombination proteins [BR:
acau03400
]
ACOJVX_05545
Enzymes [BR:
acau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACOJVX_05545
DNA replication proteins [BR:
acau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACOJVX_05545
DNA repair and recombination proteins [BR:
acau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACOJVX_05545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
XQU80964
LinkDB
All DBs
Position
complement(1234917..1236674)
Genome browser
AA seq
585 aa
AA seq
DB search
MSTRHPLLGAPPTGPGANTAPQLSFDELGTPLREVTFVVLDFETTGGNAEADHVTEIGAV
KVRGGEVLGEFGTLVDPGHPIPPAITVLTGITQAMVTGAPSLGTVLPAFLEFASGAVLVA
HNASFDVGFLRAACRRQGYDWPRPTVVCTLRLARRVLTRGETRDHKLGTLAAHFHAATTP
THRALDDARATVDVLHGLLERVGGLGVRSLEELLDYTPEVSPARRRNRELAAHLPHAPGV
YLFRGPRDEVLYVGTASDLRRRVRQYFTASETRTPIREMAALATRVDHVECSHPLEARVR
ELRLLAAHRPRYNRRSTRPDSTWWLALTDEAYPRLSVVRQPRPLAFGPFPSRRAAVTAVE
TLWRVSPVRQCTRRIPAGGQPGGQACPLLDLGRCAAPCVGRQDVDAYRPAVDELRELFAG
RDRRLLDTLSERIDHLAGERRFEDAARARDLTARLAESLDRGQRFAALAEVEELVAAAPD
GAGGWHFAVVRHGRLASAGSAPRGVPPMPVVDLLVRSAETVIPEDGPLRGAPAEEVAALW
RWLSTPGTRMVRCSRPWTEPAWSAGAWREWVGRAAAGRAAQAQPD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccaggcacccgctcctcggcgcaccccccaccggtcccggggcgaacaccgcc
ccgcaactgtccttcgacgaactggggacgccgctgcgcgaggtcaccttcgtcgtcctc
gacttcgagacgaccggggggaacgcggaggccgaccacgtcaccgagatcggggccgtg
aaggtgcggggcggcgaggtgctcggtgagttcgggacgctggtcgaccccggacatccc
atcccgcccgccatcacggtgttgaccggcatcacccaggccatggtgaccggcgcaccg
agcctgggaacggtgctgcccgcgttcctcgagttcgcgtcgggggccgtcctggtcgcc
cacaacgcctccttcgacgtcggcttcctgcgggcggcctgccgccgccagggctacgac
tggccgaggcccaccgtcgtgtgcaccctgcgcctggctcgacgggtgctcacccgaggc
gagacccgcgaccacaagctcggcacgctcgccgcgcacttccacgccgccaccacaccc
acgcaccgcgccctggacgacgcgcgggccaccgtggacgtgttgcacggactcctggag
cgggtcgggggactgggggtgcggtccctggaggaactgctcgactacacccccgaggtg
agcccggcgcgacggcggaaccgggaactcgccgcccacctgccgcacgcgcccggtgtc
tacctcttccggggcccccgcgacgaggtcctgtacgtcgggaccgcgagcgacctgcgc
cggcgggtccggcagtacttcaccgcgtccgagaccaggaccccgatccgggagatggcg
gcactcgcgaccagggtggaccacgtggagtgctcccaccccctcgaggccagggtccgg
gaactccggctgctcgcggcacaccgcccccggtacaaccggaggtccaccaggccggac
agcacatggtggttggcgctgaccgacgaggcctacccccggctcagcgtcgtccgacag
ccgaggcccctggcgttcggcccgttcccctcgcgccgggccgccgtcacggcggtcgag
accctgtggcgggtgtcccccgtgcggcagtgcacccgacgcatccccgccggtgggcaa
ccaggaggacaggcctgcccgctcctcgacctcggccggtgcgcggcaccctgcgtcggc
cgccaggacgtcgacgcctaccgccccgccgtcgacgagctgcgggagctcttcgccggc
cgggaccggcggctcctcgacaccctctccgaacgcatcgaccacctcgccggggaacgg
cgcttcgaggacgccgcacgcgcccgggacctcaccgcgcggttggcggagtcactggac
cggggccagcggttcgccgcgctggccgaggtcgaggagctcgtcgcggcggcgccggac
ggagcgggcgggtggcacttcgccgtcgtgcgccacggtcggctcgcctcggccggctcc
gcaccgcggggcgtgccaccgatgccggtggtcgacctgctcgtccgctcggctgagacg
gtcatcccggaggacggcccgctgcggggagcacccgcggaggaggtcgccgccctctgg
cggtggttgtccaccccgggaacccggatggtgcgctgctcccggccgtggaccgaaccg
gcctggtcagcgggggcgtggcgcgagtgggtcggcagggccgccgccggccgggccgcc
caggcgcagcccgactga
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