Actinoalloteichus caeruleus: ACOJVX_07535
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Entry
ACOJVX_07535 CDS
T11237
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
acau Actinoalloteichus caeruleus
Brite
KEGG Orthology (KO) [BR:
acau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acau03021
]
ACOJVX_07535
Transcription machinery [BR:
acau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACOJVX_07535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
MarR_2
HTH_3
HTH_23
HTH_Crp_2
MarR
Sigma70_ECF
DUF7343
HTH_31
HTH_24
DUF6538
KORA
HTH_Tnp_4
LacI
Motif
Other DBs
NCBI-ProteinID:
XQU81331
LinkDB
All DBs
Position
complement(1669113..1669901)
Genome browser
AA seq
262 aa
AA seq
DB search
MTEAPNQHPGSDGNGERYEHLTPLFHELAALSPDDPEHAKLRETLVTRHLPVAKHIARRF
GNRGESQEDLTQVATLGLIKAVDRFDPTHGADFLSFAVPTIMGEVRRHFRDTGWAVRVPR
RLQEMHLAISSATSELSQSLGRAPTPRELAERLEVPLEQVFEGLAASNAYRSASLDEMLL
DDETVSLGDSIGREEPELEIVEYRETLQPLLAQLPERDRQILLLRFFGNLTQTQIAKRIG
VSQMHVSRLLSRTLARLREAAE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaggcccccaaccagcacccgggctccgacggcaacggcgagcgttacgagcac
ctgaccccgctgttccacgagctggccgcgctcagcccggacgacccggagcacgcgaaa
ctgcgcgagacgctggtgaccaggcacctcccggtggcgaagcacatcgccaggaggttc
ggcaaccgaggggagtcccaggaggacctcacccaggtggcgaccctgggcctgatcaag
gccgtggaccggttcgaccccacccacggcgcggacttcctgtccttcgcggtcccgacc
atcatgggcgaggtccgccgccacttccgcgacaccgggtgggcggtgcgggtgccccgc
cggctccaggagatgcacctggcgatcagttcggcgaccagcgagctctcgcagagcctc
ggccgggcccccaccccccgggagctcgccgaacggctcgaggtcccgttggagcaggtc
ttcgagggcctggcagcgagcaacgcctaccggagcgcgtcgctggacgagatgttgctc
gacgacgagacggtctcgctcggcgactccatcgggcgggaggaacccgagctggagatc
gtggagtaccgcgagaccctgcagccgttgctcgcccagctcccggagcgggaccgccag
atcctgctgctgaggttcttcgggaacctgacgcagacccagatcgccaagcgcatcggt
gtctcgcagatgcacgtctcgcggctgctcagccgcaccctcgcccgtctgcgcgaggcc
gcggagtag
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integrated database retrieval system
