Actinoalloteichus caeruleus: ACOJVX_17925
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Entry
ACOJVX_17925 CDS
T11237
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
acau Actinoalloteichus caeruleus
Brite
KEGG Orthology (KO) [BR:
acau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acau03009
]
ACOJVX_17925 (rimO)
Enzymes [BR:
acau01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACOJVX_17925 (rimO)
Ribosome biogenesis [BR:
acau03009
]
Prokaryotic type
ribosomal protein modification factors
ACOJVX_17925 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
NfeD
Motif
Other DBs
NCBI-ProteinID:
XQU78518
LinkDB
All DBs
Position
complement(4451647..4453092)
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AA seq
481 aa
AA seq
DB search
MPTPEPPRRVAVVTLGCSRNEVDSEELAGRLSGAGWELVDTDASGEDTPSVVLVNTCGFI
ESAKKDSVDTLLAAADTGAKVVAVGCMAERYGKELADSLPEADAVLGFDHYPDMANRLDE
VLAGNAVASHTPGDRRRLLPISPVERPSALAGSAEQVAVPGHAWGPRVPRRRLDKSPVAP
LKLASGCDRRCSFCAIPSFRGSFVSRPTDDVVAEAEWLAVSGVRELFLVSENSTSYGKDL
GDLRALEKLLPRLAEVPGIDRVRVSYLQPAETRPGLVSAIATTPGVASYFDLSFQHSSES
VLRRMRRFGSTESFLGLVESVRALSPTAGLRTNVILGFPGETEDDVAELERFLTAARLDV
VGVFGYSDEENTEAAGFPDKLDPDLISERVTRVSALVEELTAQRAAERVGEEVTVLVERT
ADEEGDCTGRAEHQGPEVDGECVLTDAEGIEVGQFVRATVVDSEGVDLIVRPQEVLTRGY
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgccaacccccgaaccaccccgccgcgtcgccgtcgtcaccctgggctgctcccgcaac
gaggtcgactccgaggagttggccggccgcctcagcggtgcgggctgggagctcgtcgac
accgacgccagcggggaggacaccccctccgtcgtgctggtcaacacctgcggcttcatc
gagtccgccaagaaggattcggtggacaccctgctcgccgcggccgacaccggagccaag
gtggtcgcggtggggtgcatggccgagcggtacggcaaggaactcgccgacagcctcccc
gaggctgacgccgtcctcggcttcgaccactacccggacatggccaaccggctcgacgag
gtgctggccgggaacgcggtggcctcccacaccccgggtgaccgccgtcgcctgctgccg
atctcgccggtcgagcgcccctccgccctggccggctcggccgagcaggtggccgttccc
ggccacgcctgggggccgagggtgccgcgccgccgcctcgacaagtccccggtcgccccg
ctgaagctcgcctccggctgcgaccggcggtgttccttctgcgcgatcccgagcttccgg
ggctccttcgtctcccgccccaccgacgacgtggtggccgaggccgagtggttggccgtg
tcaggggtgcgggaactcttcctggtcagtgagaactcgacctcctacggcaaggacctc
ggggacctgcgggcgttggagaagctgctcccccgcctggccgaggtcccggggatcgac
cgggtgcgcgtctcctacctccagcccgcggagacccggccgggtctggtgagcgccatc
gccaccacaccgggggtggcctcgtacttcgacctctccttccagcactccagcgagtcg
gtgctgcgccgcatgcgccggttcgggtcgaccgagtccttcctgggcctcgtcgagagc
gtcagggcgctgtccccgaccgccggtctgcggacgaacgtcatcctggggttcccgggc
gagaccgaggacgacgtggcggagctggagcggttcctcactgcggcccgcctggacgtc
gtcggtgtcttcggctactcggacgaggagaacaccgaggcggcgggattccccgacaaa
ctggacccggacctgatctccgagcgggtgacgcgcgtctccgccctcgtggaggagctg
accgcccaacgcgccgccgaacgggtcggtgaggaggtcacggtgctggtcgagcggacc
gccgacgaggagggcgactgcaccggtcgggcggagcaccaggggcccgaagtcgacggg
gagtgcgttctcaccgatgctgagggaatcgaggtgggccagttcgtgcgggccacggtg
gtcgattccgagggcgtcgacctcatcgtgcggccgcaggaagtcctgacgaggggatac
ccgtga
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