Actinoalloteichus caeruleus: ACOJVX_18045
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Entry
ACOJVX_18045 CDS
T11237
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acau Actinoalloteichus caeruleus
Pathway
acau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACOJVX_18045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acau03019
]
ACOJVX_18045
03016 Transfer RNA biogenesis [BR:
acau03016
]
ACOJVX_18045
Enzymes [BR:
acau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACOJVX_18045
Messenger RNA biogenesis [BR:
acau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACOJVX_18045
Transfer RNA biogenesis [BR:
acau03016
]
Prokaryotic type
tRNA degradation factors
ACOJVX_18045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
XQU78541
LinkDB
All DBs
Position
complement(4485074..4487299)
Genome browser
AA seq
741 aa
AA seq
DB search
MTDNDFTEVTATIDNGKFGTRTVRFETGRLAKQAAGSVAAFLDDETMLLSATTASKQPKE
HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEVQ
VVVTVMSLNPGDLYDVLAINAASASTQLSGLPFSGPIGGVRVALIQGQWVAFPTHEQLQE
AVFDMVVAGRIVGDDVAIMMVEAEATERTIELVGEGAPSPTEEVVAQGLEAAKPFIRVLC
EAQQSLADSSGKERLEFPVFPAYEQDAYEAVERVASADLAQALTISGKLEREDRISEVKQ
AAVEKVGVGEGEAFAGREKEISAAFRSLTKQLVRQRVLRDRVRIDGRGLADIRSLGAEVS
VIPRAHGSALFERGETQILGVTTLNMLRLEQTLDTLAPETTKRYMHHYNFPPYSTGETGR
VGSPKRREIGHGALAERALVPVLPTREEFPYAVRQVSEALGSNGSTSMGSVCASTLSLLN
AGVPLKAPVAGIAMGLVSDEVDGETRYVAMTDILGAEDAYGDMDFKVAGTKDFVTALQLD
TKLDGIPSEVLAQALRQAYDARVTILEVITEAIDRPDEMSPYAPRVTSIKIPVDKIGEVI
GPKGKMINSITEETGADISIEDDGTIYVGAGDGPSADAAIDKINAIANPQLPKVGERFLG
TVVKTAAFGAFVSLVPGKDGLIHISKLGNGKRIGKVEDVAKVGDKLRVEIADIDSRGKIS
LVLVSDEEQASSEPAEAPADK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
gtgacggacaacgacttcaccgaagtcaccgcgacgatcgacaacgggaagttcggcacc
aggacggtgcgcttcgagacgggccggctcgccaagcaggccgccggcagcgtcgccgcc
ttcctggacgacgagacgatgctgctgtcggcgaccaccgcctcgaagcagccgaaggag
cacttcgacttcttcccgctcaccgtcgacgtcgaggagcggatgtacgcggccgggcgg
atccccggttcgttcttccgccgggagggccgtccctccaccgacgcgatcctgacctgc
cggctcatcgaccggccgctgcggccctccttcgtcgacgggctgcgcaacgaggtccag
gtcgtcgtcaccgtgatgagcctgaacccgggcgacctgtacgacgtgctggccatcaac
gccgcctcggcgtcgacccagctctccggtctgcccttctccggcccgattggcggcgtg
cgcgtcgccctcatccagggccagtgggtggcgttcccgacccacgagcagctccaagag
gccgtcttcgacatggtcgtcgccggccggatcgtcggtgacgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagcgcacgatcgagctggtcggcgagggcgccccctccccg
accgaggaggtcgtcgcccagggcctggaggccgccaagcccttcatccgggtgctgtgc
gaggcccagcagtcgctggccgactcctcgggcaaggagcgcctggagttcccggtgttc
ccggcctacgagcaggacgcctacgaggccgtcgagcgggtcgcctcggccgaccttgcg
caggcgctgaccatctcgggcaagctggagcgcgaggaccgcatcagcgaggtcaagcag
gccgcggtcgagaaggtcggcgtcggtgagggcgaggccttcgccggtcgggagaaggag
atctcggccgcgttccgctccctgaccaagcagctggtccggcagcgggtgctgcgggac
cgggtccgcatcgacggccgtggcctggccgacatccggagcctcggcgccgaggtgtcg
gtgatcccccgggcgcacggctccgcgctgttcgagcggggtgagacgcagatcctgggc
gtcaccacgctgaacatgctccgcctcgagcagacgctggacacgctggcgcccgagacc
accaagcggtacatgcaccactacaacttcccgccctactccaccggtgagaccggtcgg
gtcggttcgccgaagcggcgggagatcggccacggcgcgctcgccgagcgcgccctggtg
ccggtgctgcccacccgcgaggagttcccgtacgcggtccggcaggtgtcggaggcgctc
ggctccaacgggtccacctcgatgggttcggtctgcgcgtcgacgctgtccctgctcaac
gccggtgttccgctgaaggccccggttgccggcatcgcgatgggtctggtgtccgacgag
gtcgacggggagacccgttacgtcgcgatgaccgacatcctcggtgccgaggacgcctac
ggcgacatggacttcaaggtcgccggcacgaaggacttcgtgaccgccctccagctggac
accaagctcgacggcatcccctcggaggtgctggcccaggcgctccggcaggcctacgac
gccagggtgaccatcctcgaggtgatcaccgaggcgatcgaccggcccgacgagatgagc
ccctacgccccgcgcgtcaccagcatcaagatcccggtggacaagatcggtgaggtcatc
ggcccgaagggcaagatgatcaactcgatcaccgaggagaccggcgccgacatctccatc
gaggacgacggcacgatctacgtcggcgcgggcgacggcccgtccgcggacgcggcgatc
gacaagatcaacgcgatcgccaacccgcagctgccgaaggtcggtgagcgtttcctcggg
accgtcgtcaagacggccgccttcggggccttcgtctcgctggtgcccggcaaggacggc
ctgatccacatctccaagctcggcaacggcaagcggatcggcaaggtcgaggacgtggcc
aaggtcggcgacaagctccgcgtggagatcgccgacatcgacagccgcggcaagatcagc
ctggtcctcgtgtccgacgaggagcaggcgagcagcgagcccgccgaggcgcccgccgac
aagtga
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