Aeromonas caviae: VI35_03370
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Entry
VI35_03370 CDS
T05190
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
acav
Aeromonas caviae
Brite
KEGG Orthology (KO) [BR:
acav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acav03016
]
VI35_03370
Enzymes [BR:
acav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
VI35_03370
Transfer RNA biogenesis [BR:
acav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VI35_03370
Prokaryotic type
VI35_03370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ATP92265
LinkDB
All DBs
Position
704344..705402
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AA seq
352 aa
AA seq
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MLEQLAYLHGTPTARGILKAEAADFVVNEDLGFEPCGEGEHIFVRVRKTGENTAWVAGLL
ADAAGVARNAVTWAGLKDRHAVTEQWFGIHLPGKGEPDLSVIENDNIRILEVKRHNKKLR
VGYLKGNHFTLRLTGLEQADGLESRLQAIATQGVPNYYGEQRFGRGGNNLEAAKAMFAGK
RIKDRNKRSLYLSAARSMLFNAIVSARIEQGLAHQLLAGDCVMLKGSHSIFSEESVTPEL
EARLASGDVQLTAPQWGRGRLASQGAAAEFEQGVLAPYGDWCEGLEKAGLDQDRRPLLLK
PEQMSWQREDEVLTLSFFLPAGAFATSVVRELMQAEEADHGFRNPTDANSGQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaacaacttgcctatctgcacgggacgcccactgctcgcggcatcctcaaggcc
gaggccgccgacttcgtggtcaatgaagatctcgggttcgaaccttgcggcgagggtgaa
cacatcttcgtccgggtacgcaaaaccggcgagaatactgcctgggtggctggcctgctg
gccgatgcggccggggttgcccgcaatgcagtgacctgggctggtctgaaagatcgccat
gcggtgaccgaacagtggttcggcatccatctgccgggcaagggcgagccggatctctcg
gtcatcgagaacgacaacatccggatccttgaggtgaagcgccacaacaagaagctgcgg
gtcggctatctcaagggcaaccacttcaccctgcgtctcaccgggctggagcaggccgac
gggctggaatcccgtttgcaggcgatagcaacccagggggtgcccaactactacggcgag
cagcgtttcggccgaggtggcaacaacctggaggccgccaaggcgatgttcgccggcaaa
cggatcaaggatcgcaacaagcgctccctctatctgtccgccgcccgcagcatgctgttc
aatgccatcgtcagcgcccgcatcgagcagggactggcccatcagctgctggcaggcgac
tgcgtgatgctcaagggcagccactccatcttcagcgaagagagcgtgactcccgagttg
gaggcacgccttgcctccggagacgtgcagctgaccgctccccagtggggccgtggccgt
ctggcgagccagggcgctgctgccgagttcgagcaaggagtgctggccccttatggtgac
tggtgcgaaggactggagaaagccgggctggatcaggacaggcgcccgctgctgctcaag
ccggagcagatgagctggcaacgggaggacgaggtgctgaccctgtcgttcttcctgccg
gccggcgcctttgccaccagcgtggtacgcgagttaatgcaggccgaagaggccgatcac
ggtttcaggaacccaaccgatgcgaattctggtcagtaa
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