Aeromonas caviae: VI35_10595
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Entry
VI35_10595 CDS
T05190
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
acav
Aeromonas caviae
Brite
KEGG Orthology (KO) [BR:
acav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acav03016
]
VI35_10595 (rnd)
Enzymes [BR:
acav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
VI35_10595 (rnd)
Transfer RNA biogenesis [BR:
acav03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VI35_10595 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
ATP92345
UniProt:
A0A3S5WVT9
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All DBs
Position
2247611..2248723
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AA seq
370 aa
AA seq
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MQYQLISQQAELDQYLASLADVPLAIDTEFVRTRTYYPQLGLFQIYDGKQLALLDPLTLD
LSGLWQRLGRAGQIAILHASGEDLELIQHQAGHLPNQMHDTQLAAAFLGHGVSVGFGALV
NEFLGVELEKDQARTDWLARPLTPRQLEYAAADVFYLMPLYEKVMARLRESGKFPWFEQE
CQNHSARKTQGSDPRQAYLEIVNAWQLGRRELAILRELAAWRQQEAVRRDLALNFVVKEL
HLFKVAERRPASLRDLNELGLSPIEIKIHGKRMLDIVAAAQQSDPASWPDPIRRLVDFPQ
YKAELKRIKAMVEEKAKASNIPPELVASKKIIHQYFTWSWRMSAEERARADKPMLLQGWR
HELVGHLLAQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatcaactcatttcacagcaagccgaactggatcagtatctcgcttctctggcc
gacgttcctctggccatcgataccgaattcgttcgcacccgtacctactatccccagctc
ggtctgttccagatctacgatggcaagcagcttgccctgctcgatcccctgaccctggat
ctctccggtttgtggcagcgcctcggtcgggccggacagattgccatcctgcacgcctcc
ggtgaggatctggaacttatccagcatcaggcgggtcacctgcccaaccagatgcacgat
acccagctggcggcagccttcctgggtcatggcgtgtcggtggggtttggcgccttggtc
aacgaattcctcggggtcgagcttgagaaggatcaggcccgtaccgactggctggcgcgc
ccccttacccctcgtcagttggaatatgccgcggcggatgtcttctacctcatgcccctc
tacgagaaggtgatggccagactgcgcgagagcggcaagttcccctggttcgaacaggag
tgccagaaccactccgcccgcaagacccagggcagcgatccccgtcaggcctacctcgag
atagtcaacgcctggcaactgggtcgccgcgagctggccatcctgcgcgagctggccgcc
tggcgccagcaggaagcggtacgccgggatcttgccctcaacttcgtggtcaaagagcta
cacctgttcaaggtggcggagcgtcgtcccgcttcccttcgggatctcaacgaactgggc
ctctcgcccatcgagatcaagatccacggcaagcggatgctggacatcgtcgccgccgcc
cagcagagcgaccctgcgagctggcccgatcccatccgtcgcctggtggacttcccccag
tacaaggccgagctcaagcgcatcaaggccatggtggaggagaaggccaaggcgagcaac
attccaccggagctggtggcgagcaagaagatcatccaccagtacttcacctggagctgg
cgcatgagtgccgaggagcgggccagggcggacaagcccatgctgctgcaagggtggcgt
catgagctggtaggccacctgctggcccagtga
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