Aeromonas caviae: VI35_12980
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Entry
VI35_12980 CDS
T05190
Name
(GenBank) type I secretion target
KO
K20276
large repetitive protein
Organism
acav
Aeromonas caviae
Pathway
acav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VI35_12980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
Capsid_NCLDV
Big_11
CshA_repeat
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ATP90983
LinkDB
All DBs
Position
complement(2798565..2805443)
Genome browser
AA seq
2292 aa
AA seq
DB search
MRTQIIDKTVVVSSVEGNVQILLADGSSRPLQPGEILQPGARLNIADDAKLMLAPYDDKP
AEGNDVPAGAEMPPEGQPSSSVANHQQGSPEVSPEIAALQQSILQGVDPTKNFEASAAGG
APAAGGGGGIGGVAGASGNGGFVVIDRIGDATIAEAGFDTGYDTLIDQNVLQEDDLLPEN
QLDDQDESVVTQEDQAISGNVLDNSNNPDGPLDSSVISYSWGNNQRIAAGVESTLDGIGT
LIINADGSYTFTPALNYTGPVPAVNYTVTDGDDTNDSTMTITITPVDEPVSLNGLQVEGG
ELVLDEAALPDGSAPDGAALTKSSTFTFNAADGVQSLTLGGVTLISNGQVLTTFPQGIPS
PLGNQLLVIGVSYNPVTGVGSVTYSYTLNDNETHNKPANDGALTESFNVVLTDLDGDTTS
AGLDVVVLDDVPTAVSDVNLTAASENNLVLNGNVITNDVQGADGAAVTAGTLSGTYGSLV
LNANGTYTYTLNPNDGDFKALTGGGVGSEVFTYTLTDADGDVSTATLTLTIKNDDDGVTI
TNLTPKGEGGDAKVYEDDLLATRGENESAGSDSSKESTTVTGDFTISAPDGVKTLSVGGI
NIVVNGVVAGFPLSGVTTPLGNTLTITGYNPATGLVSYSYTLNDNEAHPTANGNNSLFED
FAVSLVDSDGDSASNTLSVQIVDDVPTAVSDVNLTAASENNLVLNGNVITNDVQGADGAA
VTAGTLSGTYGSLVLNANGTYTYTLNPNDGDFKALTGGGVGSEVFTYTLTDADGDVSTAT
LTLTIKNDDDGVTITNLTPKGEGGDAKVYEDDLLATRGANESAGSDSSKESTTVTGDFTI
SAPDGVKTLSVGGINIVVNGVVAGFPLSGVTTPLGNTLTITGYNPATGLVSYSYTLNDNE
AHPTANGNNSLFEDFAVSLVDSDGDSASNTLSVQIVDDVPTAVSDVNLTVASENNLVLNG
NVITNDVQGADGAAVTAGTLSGTYGSLVLNANGTYTYTLNPSDGDFKALTGGGVGSEVFT
YTLTDADGDVSTATLTLTIKNDDDGVTITNLTPKGEGGDAKVYEDDLLATRGENESAGSD
SSKESTTVTGDFTISAPDGVKTLSVGGINIVVNGVVAGFPLSGVTTPLGNTLTITGYNPA
TGLVSYSYTLNDNEAHPTANGNNSLFEDFAVSLVDSDGDSASNTLSVQIVDDVPTAVSDV
NLTAASENNLVLNGNVITNDVQGADGAAVTAGTLSGTYGSLVLNANGTYTYTLNPNDGDF
KALTGGGVGSEVFTYTLTDADGDVSTATLTLTIKNDDDGVTITNLTPKGEGGDAKVYEDD
LLATRGANESAGSDSSKESTTVTGDFTISAPDGVKTLSVGGINIVVNGVVAGFPLSGVTT
PLGNTLTITGYNPATGLVSYSYTLNDNEAHPTANGNNSLFEDFAVSLVDSDGDSASNTLS
VQIVDDVPTAVSDVNLTAASENNLVLNGNVITNDVQGADGAAVTAGTLSGTYGSLVLNAN
GTYTYTLNPNDGDFKALTGGGVGSEVFTYTLTDADGDVSTATLTLTIKNDDDGVTITNLT
PKGEGGDAKVYEDDLLATRGANESAGSDSSKESTTVTGDFTISAPDGVKTLSVGGINIVV
NGVVAGFPLSGVTTPLGNTLTITGYNPATGLVSYSYTLNDNEAHPTANGNNSLFEDFAVS
LVDSDGDSASNTLSVQIVDDVPTAVSDVNLTAASENNLVLNGNVITNDVQGADGAAVTAG
TLSGTYGSLVLNANGTYTYTLNPNDGDFKALTGGGVGSEVFTYTLTDADGDVSTATLTLT
IKNDDDGVTITNLTPKGEGGDAKVYEDDLLATRGANESAGSDSSKESTTVTGDFTISAPD
GVKTLSVGGINIVVNGVVAGFPLSGVTTPLGNTLTITGYNPATGLVSYSYTLNDNEAHPT
ANGNNSLFEDFAVSLVDSDGDSASNTLSVQIVDDVPTAVSDVNLTVASENNLVLNGNVIT
NDVQGADGAAVTAGTLSGTYGSLVLNANGTYTYTLNPNDGDFKALTGGGVGSEVFTYTLT
DADGDVSTATLTLTIKNDDDGVTITNLTPKGEGGDAKVYEDDLLATRGENESAGSDSSKE
STTVTGDFTISAPDGVKTLSVGGINIVVNGVVAGFPLSGVTTPLGNTLTITGYNPATGLV
SYSYTLNDNEAHPTANGNNSLFEDFAVSLVDSDGDSASNTLSVQIVDDVPTAVSDVNLTV
ASENNLVLNGNVITNDVQGADGAAVTAGTLSGTYGSLVLNANGTYTYTLNPNDGDFKALT
GGGWAAKCSPTP
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacccaaatcatcgacaaaaccgtggtcgtctcttccgtagaaggcaacgttcag
atcctgcttgccgatggcagcagtcgtcctctccagcctggcgagatcctgcagcctggc
gccagactcaatatcgctgatgatgccaaattgatgctggctccttacgatgacaaacct
gcagagggcaatgatgtcccggcaggggcagagatgcctccagaggggcaaccttcctca
tcggttgccaatcatcagcaaggctcgcctgaagtgtcgccagaaattgcggcgttgcaa
caatccatcctgcaaggggttgacccgaccaagaacttcgaagcctctgctgccggtggg
gcacctgccgccggtggtggtggcggtatcggcggggtcgctggggccagtggcaatggt
ggttttgttgtcatagatcgcatcggagatgcgactatagccgaggccggatttgatacc
ggctatgatacgttgatcgatcagaatgtgctgcaggaagacgatcttctgcccgagaat
cagctcgatgatcaggatgagtctgttgtcacccaggaagatcaggccatcagtggcaat
gtgctcgacaacagcaacaatccggatggtccccttgattcgtctgtcatttcctatagc
tggggcaacaatcagagaattgctgctggcgttgagagcacgctggatgggattggtacg
ctgatcatcaatgccgacggctcctatacctttacccccgcgctgaactacacaggcccc
gtacctgcggtcaattacaccgtaacggatggggatgataccaacgactccactatgacc
atcaccatcacccctgtagatgagcctgtctcgctgaatggattgcaggtcgagggtggt
gagcttgtccttgatgaagccgcgttgccggatggctcagcccccgatggcgcagccctg
accaagagcagtacctttacattcaatgcggcagatggagtgcaaagcctgacgctggga
ggtgtgacgctgatcagcaatggccaggtcttgaccaccttcccccaggggatccccagt
cctttgggaaatcaactgctggtgatcggcgtcagctacaacccggtgacaggggttggc
agcgtgacctacagctacaccctgaacgataacgaaacacataacaaacctgcaaatgat
ggggctctgacggagagcttcaacgtcgtgttgacagaccttgatggcgacacgaccagt
gcagggctggatgtcgtggtgctggacgacgtgccgacggcggtgagcgacgtcaacctg
acggcggcgagcgagaacaacctggtcctcaatggcaacgtcatcaccaacgacgtgcag
ggggcggatggcgcggcggtgaccgcgggcaccctgagcgggacttacggcagcctggtg
ctcaatgccaacggcacctacacctacaccctcaacccgaacgacggtgacttcaaggcg
ttgaccgggggcggggtgggcagcgaagtgttcacctacaccctgacggatgcggacgga
gacgtgagcacggcgaccctgaccctgaccatcaagaacgacgatgacggggtgaccatc
accaacctgacgcccaagggcgagggcggggatgcgaaggtgtacgaagacgacctgctg
gcgacccgcggcgagaatgaatcggcggggtcggacagcagcaaggagtcgaccacggtg
acgggggacttcaccatcagcgcgccggacggggtgaagaccctgagcgtgggtggcatc
aacatcgtggtgaacggggtggtggcgggcttcccgctgagcggggtgaccacgccgctg
ggcaacaccctgaccatcaccgggtacaacccggcgaccgggctggtgagctacagctac
accctgaacgacaacgaggcgcacccgacggcgaacggcaacaacagcctgttcgaagac
ttcgcggtgagcctggtggacagcgacggtgactcggcctcgaacaccctgagcgtgcag
atcgtggacgacgtgccgacggcggtgagcgacgtcaacctgacggcggcgagcgagaac
aacctggtcctcaatggcaacgtcatcaccaacgacgtgcagggggcggatggcgcggcg
gtgaccgcgggcaccctgagcgggacctacggcagcctggtgctcaatgccaacggcacc
tacacctacaccctcaacccgaacgacggtgacttcaaggcgttgaccgggggcggggtg
ggcagcgaagtgttcacctacaccctgacggatgcggacggagacgtgagcacggcgacc
ctgaccctgaccatcaagaacgacgatgacggggtgaccatcaccaacctgacgcccaag
ggcgagggcggggatgcgaaggtgtacgaagacgacctgctggcgacccgcggcgcgaat
gagtcggcggggtcggacagcagcaaggagtcgaccacggtgacaggggacttcaccatc
agcgcgccggacggggtgaagaccctgagcgtgggtggcatcaacatcgtggtgaacggg
gtggtggcgggcttcccgctgagcggggtgaccacgccgctgggcaacaccctgaccatc
accgggtacaacccggcgaccgggctggtgagctacagctacaccctgaacgacaacgag
gcgcacccgacggcgaacggcaacaacagcctgttcgaagacttcgcggtgagcctggtg
gacagcgacggggactcggcctcgaacaccctgagcgtgcagatcgtggacgacgtgccg
acggcggtgagcgacgtcaacctgacggtggcgagcgagaacaacctggtcctcaatggc
aatgtcatcaccaacgacgtgcagggggcggatggcgcggcagtgaccgcgggcaccctg
agcgggacctacggcagcctggtgctcaatgccaacggcacctacacctacaccctcaac
ccgagcgacggtgacttcaaggcgctgaccgggggcggggtgggcagtgaagtgttcacc
tacaccctgacggatgcggacggagacgtgagcacggcgaccctgaccctgaccatcaag
aacgacgatgacggggtgaccatcaccaacctgacgcccaagggcgagggcggggatgcg
aaggtgtacgaagacgacctgctggcgacccgcggcgagaatgaatcggcggggtcggac
agcagcaaggagtcgaccacggtgacgggggacttcaccatcagcgcgccggacggggtg
aagaccctgagcgtgggtggcatcaacatcgtggtgaacggggtggtggcgggcttcccg
ctgagcggggtgaccacgccgctgggcaacaccctgaccatcaccgggtacaacccggcg
accgggctggtgagctacagctacaccctgaacgacaacgaggcgcacccgacggcgaac
ggcaacaacagcctgttcgaagacttcgcggtgagcctggtggacagcgacggtgactcg
gcctcgaacaccctgagcgtgcagatcgtggacgacgtgccgacggcggtgagcgacgtc
aacctgacggcggcgagcgagaacaacctggtcctcaatggcaacgtcatcaccaacgac
gtgcagggggcggatggcgcggcggtgaccgcgggcaccctgagcgggacctacggcagc
ctggtgctcaatgccaacggcacctacacctacaccctcaacccgaacgacggtgacttc
aaggcgttgaccgggggcggggtgggcagcgaagtgttcacctacaccctgacggatgcg
gacggagacgtgagcacggcgaccctgaccctgaccatcaagaacgacgatgacggggtg
accatcaccaacctgacgcccaagggcgagggcggggatgcgaaggtgtacgaagacgac
ctgctggcgacccgcggcgcgaatgaatcggcggggtcggacagcagcaaggagtcgacc
acggtgacaggggacttcaccatcagcgcgccggacggggtgaagaccctgagcgtgggt
ggcatcaacatcgtggtgaacggggtggtggcgggcttcccgctgagcggggtgaccacg
ccgctgggcaacaccctgaccatcaccgggtacaacccggcgaccgggctggtgagctac
agctacaccctgaacgacaacgaggcgcacccgacggcgaacggcaacaacagcctgttc
gaagacttcgcggtgagcctggtggacagcgacggtgactcggcctcgaacaccctgagc
gtgcagatcgtggacgacgtgccgacggcggtgagcgacgtcaacctgacggcggcgagc
gagaacaacctggtcctcaatggcaacgtcatcaccaacgacgtgcagggggcggatggc
gcggcggtgaccgcgggcaccctgagcgggacctacggcagcctggtgctcaatgccaac
ggcacctacacctacaccctcaacccgaacgacggtgacttcaaggcgttgaccgggggc
ggggtgggcagcgaagtgttcacctacaccctgacggatgcggacggagacgtgagcacg
gcgaccctgaccctgaccatcaagaacgacgatgacggggtgaccatcaccaacctgacg
cccaagggcgagggcggggatgcgaaggtgtacgaagacgacctgctggcgacccgcggc
gcgaatgaatcggcggggtcggacagcagcaaggagtcgaccacggtgacaggggacttc
accatcagcgcgccggacggggtgaagaccctgagcgtgggtggcatcaacatcgtggtg
aacggggtggtggcgggcttcccgctgagcggggtgaccacgccgctgggcaacaccctg
accatcaccgggtacaacccggcgaccgggctggtgagctacagctacaccctgaacgac
aacgaggcgcacccgacggcgaacggcaacaacagcctgttcgaagacttcgcggtgagc
ctggtggacagcgacggtgactcggcctcgaacaccctgagcgtgcagatcgtggacgac
gtgccgacggcggtgagcgacgtcaacctgacggcggcgagcgagaacaacctggtcctc
aatggcaacgtcatcaccaacgacgtgcagggggcggatggcgcggcggtgaccgcgggc
accctgagcgggacctacggcagcctggtgctcaatgccaacggcacctacacctacacc
ctcaacccgaacgacggtgacttcaaggcgttgaccgggggcggggtgggcagcgaagtg
ttcacctacaccctgacggatgcggacggagacgtgagcacggcgaccctgaccctgacc
atcaagaacgacgatgacggggtgaccatcaccaacctgacgcccaagggcgagggcggg
gatgcgaaggtgtacgaagacgacctgctggcgacccgcggcgcgaatgaatcggcgggg
tcggacagcagcaaggagtcgaccacggtgacaggggacttcaccatcagcgcgccggac
ggggtgaagaccctgagcgtgggtggcatcaacatcgtggtgaacggggtggtggcgggc
ttcccgctgagcggggtgaccacgccgctgggcaacaccctgaccatcaccgggtacaac
ccggcgaccgggctggtgagctacagctacaccctgaacgacaacgaggcgcacccgacg
gcgaacggcaacaacagcctgttcgaagacttcgcggtgagcctggtggacagcgacggt
gactcggcctcgaacaccctgagcgtgcagatcgtggacgacgtgccgacggcggtgagc
gacgtcaacctgacggtagcgagcgagaacaacctggtcctcaatggcaacgtcatcacc
aacgacgtgcagggggcggatggcgcggcggtgaccgcgggcaccctgagcgggacttac
ggcagcctggtgctcaatgccaacggcacctacacctacaccctcaacccgaacgacggt
gacttcaaggcgttgaccgggggcggggtgggcagcgaagtgttcacctacaccctgacg
gatgcggacggagacgtgagcacggcgaccctgaccctgaccatcaagaacgacgatgac
ggggtgaccatcaccaacctgacgcccaagggcgagggcggggatgcgaaggtgtacgaa
gacgacctgctggcgacccgcggcgagaatgaatcggcggggtcggacagcagcaaggag
tcgaccacggtgacaggggacttcaccatcagcgcaccggacggggtgaagaccctgagc
gtgggtggcatcaacatcgtggtgaacggggtggtggcgggcttcccgctgagcggggtg
accacgccgctgggcaacaccctgaccatcaccgggtacaacccggcgaccgggctggtg
agctacagctacaccctgaacgacaacgaggcgcacccgacggcgaacggcaacaacagc
ctgttcgaagacttcgcggtgagcctggtggacagcgacggggactcggcctcgaacacc
ctgagcgtgcagatcgtggacgacgtgccgacggcggtgagcgacgtcaacctgacggta
gcgagcgagaacaacctggtcctcaatggcaatgtcatcaccaacgacgtgcagggggcg
gatggcgcggcggtgaccgcgggcaccctgagcgggacttacggcagcctggtgctcaat
gccaacggcacctacacctacaccctcaacccgaacgacggtgacttcaaggcgttgacc
gggggcgggtgggcagcgaagtgttcacctacaccctga
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integrated database retrieval system
