Entry |
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Name |
(GenBank) exonuclease SbcC
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KO |
K03546 | DNA repair protein SbcC/Rad50 |
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Organism |
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Brite |
KEGG Orthology (KO) [BR:acav00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:acav03400]
VI35_14725
DNA repair and recombination proteins [BR:acav03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VI35_14725
Archaeal homologous recombinant proteins
VI35_14725
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(3194211..3197966)
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AA seq |
1251 aa
MKILSLSGENLASLTGQFTIDFAGGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRIWLARWAVRRAR
NRAEGRFQAQERSLTDVASGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL
KSSADERSALLERMTGTELYSAISVQTHERAREEQQKLAAISQRRGDVALMDEATREQWV
SQQVSLATSLKHEQQQQQLMQDLRDLNGRIAAQLQACQEGEEALAAAEAAHAAAAPEREE
FVRAEQAQVARADHDELARLTLEVQQQEKALAELGPELGKLEEKTQQGALTEQQVLAEKI
AAEREWGALQPELKRAQELDTRIREKQQQLQKIQQEGAQEREVQLTLEQGWRQQCQQVEQ
LKGQHQQWGAWLEEHKELAPVARQWQPLLTAMQDWAEDADRLQQLLTLREHKLRALRQLQ
HQLEQGQQERDYWQREQARLQQQQHELQEQQWEGRLAKAQEQWQGQTEQLGQLRQLLELA
DYGRNHGEQHGRLQQEIVQLEQALGKLAILGDELTPARERLALQRDEARHALEQSRAIAS
FEQHRHILRDGEPCPLCGAEEHPYHQSQPQVAGILGQLAERVRSLELEWDRLNHQYIQCE
SERQELARQLAVRQQHLPELETRAEQLTQRWQQLGGAELLGHPLPLRQSPIEWNELMSTL
LGRGQSLEQGLVRSQQQLREAQQGQQQLQAVRQQLSQLASQHQQFEQQWQEADRQRIALE
GEVKAMGEQETTLRQRLEQGGSRLDEQMGGQPWRQWLGSQQWHEWQRACEAWLHGQSEWE
RLTGEIASLTPALSAQEARLQTQHELLHKLERDYKEHEQQRQGLVTSRAACLGGEEIALV
ESRWQQRLQQLASELETMQGAARALRERQTELKTRLSHLEQEKQVSSRRRREVLGRWAAH
ASSLGIAEYDLRRLLAMSPDELKGRRAALQALEDARAEARTRLTERQRALALEESKRDRY
REHHPELAALAPPELDSRLTALEAHCRALDEQLFQCKSTLAQAEAAALKAGTLQEELAAQ
QAVADHWQRLCDLIGSASGAKLRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLA
LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS
LDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQVRVEALGGGESRVVLPG |
NT seq |
3756 nt +upstreamnt +downstreamnt
atgaaaatcttgtcgctgtcaggggagaatctggccagcctgaccggtcaattcaccatc
gattttgccggtggcgccctgggggccgccggcctgtttgccatcaccggcaataccggc
gcgggcaagagtaccctgctcgatgccatctgtctggcactctacgacgagatgccgcgc
tttatcgccaatcgcaagaacgtcgccgaagtgggccgcatggatgacgaggagaagctc
aaggccaacgatgtgcgcggcatcctcagccgcggccacgccagcggttttgccgaggtg
cagtttcgcggctgtgacggccgcatctggctggcccgctgggcggtacgccgtgcccgc
aaccgcgccgaggggcgctttcaggcccaggagcgcagcctgaccgacgtggcgtcgggc
caggtgttcagtggcagcaagcgggagctgcaggatcgcatcgacgagctggtgggactc
tcctgggagcagtttcgccgcgccgtcatcctgccccagggggagtttgccgccttcctc
aagtcgagcgccgacgagcgttcggccctgctcgaacggatgaccggcaccgagctctac
tccgctatttcggtccagacccatgagcgggcgcgggaggagcagcagaaactggctgcc
atcagccagcggcgcggtgacgtggcgctgatggacgaggcgacccgcgagcagtgggtg
agccagcaggtcagcctcgccaccagcctcaagcacgagcagcagcaacagcagctgatg
caggacttgcgcgatctcaacggccgtatcgctgcccagttgcaggcctgtcaggaggga
gaggaggcccttgccgcggccgaggctgcccacgctgcggccgctcccgagcgcgaggag
ttcgtccgcgccgagcaggcccaggtggcccgcgcggatcacgacgaactggctcgcctc
accctggaggtgcagcagcaggagaaggcgctggccgagcttggccctgaacttggcaag
ctggaggagaagacccagcagggcgccctcaccgaacagcaagtgctggcggagaagatc
gccgccgagcgcgagtggggcgccctgcagcctgaactcaaacgggcgcaggagctcgac
acccgcattcgggaaaagcagcagcaactgcagaagatccagcaggagggggcgcaggag
cgggaggtgcagctcaccctggagcagggctggcgccagcagtgccagcaggtggagcag
ctcaagggccagcaccagcagtggggtgcctggcttgaggagcacaaggagctggcgccg
gtggcccgccagtggcagcccctgctcaccgccatgcaggattgggccgaggatgccgac
aggctgcagcaactgctcaccctgcgcgaacacaagctgcgcgccctcaggcagttgcaa
catcagctggaacaggggcagcaggagcgcgactattggcagcgcgagcaggcgcgactg
cagcagcaacagcacgagctgcaggagcagcagtgggaggggcgtctggccaaggcgcag
gagcagtggcaagggcagactgagcagctgggccagctgcgccagctgttggagctggcg
gactatggccgcaatcacggtgagcagcatggtcgcctgcagcaggagatcgtccagctg
gagcaggcgctcggcaagctggccatcctcggcgacgagctgacgccggcccgcgagcgg
ctcgccctgcaacgggacgaggcgcgtcacgcactggaacagtcccgtgccatcgccagt
ttcgagcagcatcgccatatcctgcgcgacggtgaaccttgcccgctctgcggtgccgag
gagcacccctatcaccagagtcagccacaggtggcgggcattctggggcagctggcggag
cgcgtccgcagcctggagcttgagtgggatcggctcaatcaccaatacattcagtgcgag
agtgaacgccaggagctggcccgccagctggcggtgcgtcagcaacatctacctgagctg
gagacgcgcgccgagcagctgacccagcgctggcagcagctcggcggtgccgagctgctg
ggccatccgttgccgctacgtcagagcccgatcgagtggaacgaattgatgagtaccctg
ctcggtcgcggccagagtctggagcaggggctggtccgcagccagcagcaactgcgcgag
gcccagcaggggcagcagcagttgcaggccgtgcgccagcagctgagtcagctggccagc
cagcaccagcagttcgagcagcagtggcaggaggccgaccgccagcgcatcgccctggaa
ggggaggtgaaggcaatgggcgagcaggaaacgaccctgcgccagcgccttgagcaggga
ggcagccgactcgatgagcagatgggaggccagccctggcgccagtggctgggcagccag
cagtggcacgagtggcagcgggcctgcgaggcctggctgcacggccagagcgagtgggag
cggctgaccggcgagattgccagcctcaccccggccctgagcgcccaggaggcgcgtctg
cagacccagcacgagctgctgcacaagctcgagcgtgactacaaggagcatgaacagcaa
cgacaggggctggtcaccagccgcgcggcctgtctggggggcgaggagattgccctggtc
gagagccgctggcagcagcggctgcagcagctggccagcgagctggagacgatgcagggg
gcggcccgcgccctgcgcgagcgtcagaccgagctcaagacccgtctcagccatctggag
caggagaagcaggtgagcagccggcggcgacgggaggtgctggggcgctgggctgcccac
gccagcagcctcggcatcgccgaatatgacctgcgccgcctgctggccatgagcccggat
gagctcaaggggcgccgcgccgccttgcaggcgctggaggatgcccgcgccgaggcgcgt
acccgtttgaccgagcggcagcgggcgctggcactggaggagagcaagcgggatcgttac
cgcgagcatcaccccgagctggccgcgttggcgccgccggagctcgacagccggctgacg
gcgctggaggcgcactgccgcgctctcgacgagcagctgttccagtgcaagagcacgctg
gcccaggccgaggcggcggccctcaaagcgggcaccttgcaggaggaactggctgcccag
caggcggtggcggatcactggcagcgcctctgtgaccttatcggttcggccagcggcgcc
aagctgcgcaccttcgcccagagcctcaccctggagcggctgctgctggaggccaacgcc
cagctcgccgagctctccccccgctatcggctggagcgagtgcccggcaccgatctggca
ctgcaggtggtggatctcgacatgggggatgaggtgcgctcggtggattccctctccggc
ggcgagagcttcctggtgtcgctggcgctggcgctggccctctccagcctgtcgtcacgg
cagacccaggtcgagtcgctgttcatcgacgaagggtttggcaccctggatccggacagt
ctggatctggcgctctcaagccttgattccctgcaggcggccggtcgccagatcggggtt
atctcccacgtgcagaccctggtggagcggatcggcgtgcaggtgcgggtggaggccctc
ggtggcggcgaaagccgggtggtattgcccggctga |