Aeromonas caviae: VI35_14725
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Entry
VI35_14725 CDS
T05190
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
acav
Aeromonas caviae
Brite
KEGG Orthology (KO) [BR:
acav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acav03400
]
VI35_14725
DNA repair and recombination proteins [BR:
acav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VI35_14725
Archaeal homologous recombinant proteins
VI35_14725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
ABC_ATPase
Hormone_1
MMR_HSR1
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATP91240
LinkDB
All DBs
Position
complement(3194211..3197966)
Genome browser
AA seq
1251 aa
AA seq
DB search
MKILSLSGENLASLTGQFTIDFAGGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRIWLARWAVRRAR
NRAEGRFQAQERSLTDVASGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL
KSSADERSALLERMTGTELYSAISVQTHERAREEQQKLAAISQRRGDVALMDEATREQWV
SQQVSLATSLKHEQQQQQLMQDLRDLNGRIAAQLQACQEGEEALAAAEAAHAAAAPEREE
FVRAEQAQVARADHDELARLTLEVQQQEKALAELGPELGKLEEKTQQGALTEQQVLAEKI
AAEREWGALQPELKRAQELDTRIREKQQQLQKIQQEGAQEREVQLTLEQGWRQQCQQVEQ
LKGQHQQWGAWLEEHKELAPVARQWQPLLTAMQDWAEDADRLQQLLTLREHKLRALRQLQ
HQLEQGQQERDYWQREQARLQQQQHELQEQQWEGRLAKAQEQWQGQTEQLGQLRQLLELA
DYGRNHGEQHGRLQQEIVQLEQALGKLAILGDELTPARERLALQRDEARHALEQSRAIAS
FEQHRHILRDGEPCPLCGAEEHPYHQSQPQVAGILGQLAERVRSLELEWDRLNHQYIQCE
SERQELARQLAVRQQHLPELETRAEQLTQRWQQLGGAELLGHPLPLRQSPIEWNELMSTL
LGRGQSLEQGLVRSQQQLREAQQGQQQLQAVRQQLSQLASQHQQFEQQWQEADRQRIALE
GEVKAMGEQETTLRQRLEQGGSRLDEQMGGQPWRQWLGSQQWHEWQRACEAWLHGQSEWE
RLTGEIASLTPALSAQEARLQTQHELLHKLERDYKEHEQQRQGLVTSRAACLGGEEIALV
ESRWQQRLQQLASELETMQGAARALRERQTELKTRLSHLEQEKQVSSRRRREVLGRWAAH
ASSLGIAEYDLRRLLAMSPDELKGRRAALQALEDARAEARTRLTERQRALALEESKRDRY
REHHPELAALAPPELDSRLTALEAHCRALDEQLFQCKSTLAQAEAAALKAGTLQEELAAQ
QAVADHWQRLCDLIGSASGAKLRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLA
LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS
LDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQVRVEALGGGESRVVLPG
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttgtcgctgtcaggggagaatctggccagcctgaccggtcaattcaccatc
gattttgccggtggcgccctgggggccgccggcctgtttgccatcaccggcaataccggc
gcgggcaagagtaccctgctcgatgccatctgtctggcactctacgacgagatgccgcgc
tttatcgccaatcgcaagaacgtcgccgaagtgggccgcatggatgacgaggagaagctc
aaggccaacgatgtgcgcggcatcctcagccgcggccacgccagcggttttgccgaggtg
cagtttcgcggctgtgacggccgcatctggctggcccgctgggcggtacgccgtgcccgc
aaccgcgccgaggggcgctttcaggcccaggagcgcagcctgaccgacgtggcgtcgggc
caggtgttcagtggcagcaagcgggagctgcaggatcgcatcgacgagctggtgggactc
tcctgggagcagtttcgccgcgccgtcatcctgccccagggggagtttgccgccttcctc
aagtcgagcgccgacgagcgttcggccctgctcgaacggatgaccggcaccgagctctac
tccgctatttcggtccagacccatgagcgggcgcgggaggagcagcagaaactggctgcc
atcagccagcggcgcggtgacgtggcgctgatggacgaggcgacccgcgagcagtgggtg
agccagcaggtcagcctcgccaccagcctcaagcacgagcagcagcaacagcagctgatg
caggacttgcgcgatctcaacggccgtatcgctgcccagttgcaggcctgtcaggaggga
gaggaggcccttgccgcggccgaggctgcccacgctgcggccgctcccgagcgcgaggag
ttcgtccgcgccgagcaggcccaggtggcccgcgcggatcacgacgaactggctcgcctc
accctggaggtgcagcagcaggagaaggcgctggccgagcttggccctgaacttggcaag
ctggaggagaagacccagcagggcgccctcaccgaacagcaagtgctggcggagaagatc
gccgccgagcgcgagtggggcgccctgcagcctgaactcaaacgggcgcaggagctcgac
acccgcattcgggaaaagcagcagcaactgcagaagatccagcaggagggggcgcaggag
cgggaggtgcagctcaccctggagcagggctggcgccagcagtgccagcaggtggagcag
ctcaagggccagcaccagcagtggggtgcctggcttgaggagcacaaggagctggcgccg
gtggcccgccagtggcagcccctgctcaccgccatgcaggattgggccgaggatgccgac
aggctgcagcaactgctcaccctgcgcgaacacaagctgcgcgccctcaggcagttgcaa
catcagctggaacaggggcagcaggagcgcgactattggcagcgcgagcaggcgcgactg
cagcagcaacagcacgagctgcaggagcagcagtgggaggggcgtctggccaaggcgcag
gagcagtggcaagggcagactgagcagctgggccagctgcgccagctgttggagctggcg
gactatggccgcaatcacggtgagcagcatggtcgcctgcagcaggagatcgtccagctg
gagcaggcgctcggcaagctggccatcctcggcgacgagctgacgccggcccgcgagcgg
ctcgccctgcaacgggacgaggcgcgtcacgcactggaacagtcccgtgccatcgccagt
ttcgagcagcatcgccatatcctgcgcgacggtgaaccttgcccgctctgcggtgccgag
gagcacccctatcaccagagtcagccacaggtggcgggcattctggggcagctggcggag
cgcgtccgcagcctggagcttgagtgggatcggctcaatcaccaatacattcagtgcgag
agtgaacgccaggagctggcccgccagctggcggtgcgtcagcaacatctacctgagctg
gagacgcgcgccgagcagctgacccagcgctggcagcagctcggcggtgccgagctgctg
ggccatccgttgccgctacgtcagagcccgatcgagtggaacgaattgatgagtaccctg
ctcggtcgcggccagagtctggagcaggggctggtccgcagccagcagcaactgcgcgag
gcccagcaggggcagcagcagttgcaggccgtgcgccagcagctgagtcagctggccagc
cagcaccagcagttcgagcagcagtggcaggaggccgaccgccagcgcatcgccctggaa
ggggaggtgaaggcaatgggcgagcaggaaacgaccctgcgccagcgccttgagcaggga
ggcagccgactcgatgagcagatgggaggccagccctggcgccagtggctgggcagccag
cagtggcacgagtggcagcgggcctgcgaggcctggctgcacggccagagcgagtgggag
cggctgaccggcgagattgccagcctcaccccggccctgagcgcccaggaggcgcgtctg
cagacccagcacgagctgctgcacaagctcgagcgtgactacaaggagcatgaacagcaa
cgacaggggctggtcaccagccgcgcggcctgtctggggggcgaggagattgccctggtc
gagagccgctggcagcagcggctgcagcagctggccagcgagctggagacgatgcagggg
gcggcccgcgccctgcgcgagcgtcagaccgagctcaagacccgtctcagccatctggag
caggagaagcaggtgagcagccggcggcgacgggaggtgctggggcgctgggctgcccac
gccagcagcctcggcatcgccgaatatgacctgcgccgcctgctggccatgagcccggat
gagctcaaggggcgccgcgccgccttgcaggcgctggaggatgcccgcgccgaggcgcgt
acccgtttgaccgagcggcagcgggcgctggcactggaggagagcaagcgggatcgttac
cgcgagcatcaccccgagctggccgcgttggcgccgccggagctcgacagccggctgacg
gcgctggaggcgcactgccgcgctctcgacgagcagctgttccagtgcaagagcacgctg
gcccaggccgaggcggcggccctcaaagcgggcaccttgcaggaggaactggctgcccag
caggcggtggcggatcactggcagcgcctctgtgaccttatcggttcggccagcggcgcc
aagctgcgcaccttcgcccagagcctcaccctggagcggctgctgctggaggccaacgcc
cagctcgccgagctctccccccgctatcggctggagcgagtgcccggcaccgatctggca
ctgcaggtggtggatctcgacatgggggatgaggtgcgctcggtggattccctctccggc
ggcgagagcttcctggtgtcgctggcgctggcgctggccctctccagcctgtcgtcacgg
cagacccaggtcgagtcgctgttcatcgacgaagggtttggcaccctggatccggacagt
ctggatctggcgctctcaagccttgattccctgcaggcggccggtcgccagatcggggtt
atctcccacgtgcagaccctggtggagcggatcggcgtgcaggtgcgggtggaggccctc
ggtggcggcgaaagccgggtggtattgcccggctga
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