Aeromonas caviae: VI35_18360
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Entry
VI35_18360 CDS
T05190
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
acav
Aeromonas caviae
Brite
KEGG Orthology (KO) [BR:
acav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acav03009
]
VI35_18360
Enzymes [BR:
acav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
VI35_18360
Ribosome biogenesis [BR:
acav03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VI35_18360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
MTS
PrmA
Cons_hypoth95
Methyltransf_15
PCMT
Methyltransf_11
TRM5-TYW2_MTfase
N6_Mtase
UPF0020
AKAP7_NLS
RrnaAD
Methyltrans_SAM
Motif
Other DBs
NCBI-ProteinID:
ATP91788
UniProt:
A0A6S4T2A3
LinkDB
All DBs
Position
complement(3973279..3974631)
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AA seq
450 aa
AA seq
DB search
MPLVGHQHQIDILELTDKGDGKGRLFDRPLFVEGLLPGEQALVELTEVKPNYLHGKLVEL
TQPSADRVPDFCPNTECGGCQVRPLAYPAQLALKQSLVQSALEQVGLGEAVVNPILGMET
PFAYRNKAQYAVRGSEAGAEIGFYRKHSHDLITADDCAVQDSLHVELNARVRNWMREHDI
AAYDEVAHTGCVRNLMTRKGFKSGELMVVLVTLGEALPFEAELLAALADLPVTTLVQNIN
EARTNRILGDKNRVLLGSGVIRDKIHELEFEISPLSFFQNNPSQTDVLYSKALEYCELTG
SETVFDIYCGIGTISLFLAGKAAKVVGIESVESAISDARRNAALNGIEQTEFHVGKAEQL
MPALHADGVSADVVVMDPPRKGCDKAVLQTLVAMAPRRLVYVSCNPQTLARDLAWLVKQG
FVLDEVQPVDMFPHSMHVEAVARLSLPAKA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgccgttagtgggacaccaacatcagatcgatattctggaactgaccgacaagggggat
ggcaagggtcgcctgttcgatcgccccctgtttgtcgagggtctgctgcccggtgagcag
gcgctggtcgagttgaccgaggtcaaaccgaactacctgcacggcaagctggtcgagttg
acccagccgtccgccgacagggtgccggatttctgccccaacaccgaatgcggtggctgc
caggtgcgcccgctggcctatccggcccagcttgccctcaagcagagcctggtgcagagc
gccctggagcaggtcgggctgggtgaggccgtggtcaaccccatcctcggcatggagacg
ccgtttgcctaccgcaacaaggcccagtacgcggtgcgtggcagcgaggcgggcgccgag
atcggcttctaccgcaagcactcccatgacctcatcaccgccgatgattgcgcggtgcag
gactcgctgcacgtggagctcaacgcccgggtacgcaactggatgcgcgagcacgacatc
gcggcctatgacgaggtggcccacaccggctgcgtgcgcaacctgatgacccgcaagggc
ttcaagagcggcgagctgatggtggtgctggtgaccctgggcgaagcgctgccgttcgaa
gccgagctgctggcggccctggcagatctgccggtcactactctggtgcagaacatcaac
gaggcgcgcaccaaccgcatcctgggtgacaagaaccgggtgctgttgggcagcggggtg
atccgcgacaagatccacgagctcgaattcgagatctcgcccctctccttcttccagaac
aacccgagccagaccgacgtgctctactccaaggcgctggagtattgcgagctgaccggc
agcgagacggtgttcgacatctattgcggcatcggcaccatctccctgttcctggcaggc
aaggccgccaaggtggtggggattgagtcggtggagagtgccatcagcgacgcccgtcgc
aatgcggccctcaacggcatcgagcagaccgagttccacgtgggcaaggcggagcagctg
atgcctgccctgcatgccgacggggtgagtgccgacgtggtggtgatggatccgccccgc
aagggctgtgacaaggcggtattgcagaccctggtggccatggcgccgcgccggctggtc
tatgtctcctgcaacccccagaccctggcccgggatctcgcctggctggtcaagcagggc
ttcgtgctggacgaggtgcagccggtggacatgttcccgcactccatgcacgtggaagcc
gttgctcgcctgagcctgccagcgaaggcctga
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