Aeromonas caviae: VI35_19550
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Entry
VI35_19550 CDS
T05190
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
acav
Aeromonas caviae
Brite
KEGG Orthology (KO) [BR:
acav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acav03021
]
VI35_19550 (rpoH)
Transcription machinery [BR:
acav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VI35_19550 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
2Fe-2S_thioredx
UCR_14kD
DUF7827
Motif
Other DBs
NCBI-ProteinID:
ATP91972
UniProt:
A0A081LMG7
LinkDB
All DBs
Position
complement(4215983..4216837)
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AA seq
284 aa
AA seq
DB search
MGTSLQRTMALIPQGSLEGYIQAVNSIPVLSAEEERELAMRLQQDGDLEAARQLVMSHLR
FVVHVAKSYSGYGLPQADLVQEGNIGLMKAVKRFDPSVGVRLVSFAVHWIKAEIHEYVLR
NWRMVKVATTKAQRKLFFNLRKSKKRLGWLNHEEVQAVAADLGVSAADVTEMEARMSNYD
QAFDLVGDDEDEGGFAPVHYLEDKSSDLAANIENDNWDSHATRRLSAAMATLDERSQHII
RARWLDDESKTTLQELADTYGVSAERVRQLEKNALKKLKDAMDA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgggaacttcattgcaacgcactatggctctgattccgcaaggcagtctggaaggctat
atccaggccgtcaactcgatccctgtgctgagcgcagaggaagagcgcgaactggcgatg
cgtctgcagcaggatggcgatctcgaagctgcacgccagctcgttatgtcgcacctgcgt
tttgtcgttcacgtggccaagagctactccggctatggcctgcctcaggccgatctggtg
caggaaggcaacatcggcctgatgaaagccgtcaaacgcttcgacccgagcgtgggcgtg
cgtctggtctccttcgccgtgcactggatcaaggccgaaatccacgaatatgtgttgcgc
aactggcgtatggtcaaggtggcgaccaccaaggcccagcgcaagctgttcttcaacctg
cgtaaatccaagaagcgtctgggctggctgaaccacgaagaggtacaggccgtggctgcc
gacctcggggtatccgctgccgacgtcaccgagatggaagcgcgcatgagcaattacgat
caggctttcgatctggtcggtgacgatgaagacgagggtggcttcgcgccggtgcactat
ctggaagacaaatcttccgatctcgccgcgaacatcgagaacgacaactgggacagccat
gccacccgtcgtctgagtgcggccatggcgaccctggacgagcgcagccagcacatcatc
cgtgcccgctggctcgatgacgagagcaagaccaccctgcaggagctggccgatacttac
ggcgtttcggccgagcgggtgcgccagcttgagaaaaacgcgctcaagaagctgaaagat
gccatggatgcctga
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