Aeromonas caviae: VI35_19765
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Entry
VI35_19765 CDS
T05190
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
acav
Aeromonas caviae
Pathway
acav03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VI35_19765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acav03021
]
VI35_19765
03400 DNA repair and recombination proteins [BR:
acav03400
]
VI35_19765
Enzymes [BR:
acav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VI35_19765
Transcription machinery [BR:
acav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VI35_19765
DNA repair and recombination proteins [BR:
acav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VI35_19765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ATP92004
LinkDB
All DBs
Position
complement(4259775..4260764)
Genome browser
AA seq
329 aa
AA seq
DB search
MLGSVTDFLKPRLVDIEQVSPTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEILLNLKGIAVKLEGKDEVTLSLTKSGTGPVTAGDITHGDE
VEIVNPEHVICHLTGANAEISMRLKVQRGRGYVPASARVHNDDEERPIGRLLLDSAFSPI
VRIAYNVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRSATILAEQLEAFVDLRDVSVP
EKKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgctgggttctgtaacagattttcttaaaccgcggctagttgacatcgagcaagttagc
ccgactcacgcgaaagtgactctcgagccgcttgagcgtggctttggccacacgctgggc
aatgccctgcgtcgtattttgctgtcatctatgcccggttgtgcggttactgaagtcgag
atcgacggagtactgcacgagtacagcagcaaagaaggtgtacaggaagacattcttgaa
atcctgctcaacctgaaaggtatcgctgtgaagctggaaggcaaggacgaggtaactctg
tccctgaccaagtctggaacaggccccgttaccgctggtgatatcactcacggtgatgaa
gtcgagatcgtaaacccggagcacgtaatctgccacctgactggtgcaaatgctgagatc
agcatgcgcctgaaagttcagcgcggtcgtggttatgtgcctgcttctgctcgtgttcac
aacgatgatgaagagcgtcctatcggtcgcctgctgctggactccgcgttcagccccatc
gttcgcatcgcctacaatgtcgaggcggcacgtgtggaacagcgcaccgacttggacaag
ctggttatcgacatggagaccaatggtactctggatccggaagaagccatccgtcgttcc
gccactattctggcagagcaactggaagccttcgtggatctgcgcgatgtcagcgtgccc
gagaagaaagaagagaaacccgagtttgatccgattctgctgcgtcctgtcgatgatttg
gagctgacagttcgttcagcgaactgtctgaaggcagaagctatccactatattggtgat
ctggtacagcgtaccgaagttgagttgcttaagactcctaacctcggtaagaagtccctg
actgagatcaaggacgtgttggcctcccgtggtctgtctcttggcatgcgccttgagaac
tggccgcccgccagcatcgctgacgagtaa
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