Acinetobacter sp. A1-4-2: ABJ384_06270
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Entry
ABJ384_06270 CDS
T11518
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acaz Acinetobacter sp. A1-4-2
Pathway
acaz03030
DNA replication
acaz03430
Mismatch repair
acaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABJ384_06270 (dnaE)
03430 Mismatch repair
ABJ384_06270 (dnaE)
03440 Homologous recombination
ABJ384_06270 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acaz03032
]
ABJ384_06270 (dnaE)
03400 DNA repair and recombination proteins [BR:
acaz03400
]
ABJ384_06270 (dnaE)
Enzymes [BR:
acaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABJ384_06270 (dnaE)
DNA replication proteins [BR:
acaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABJ384_06270 (dnaE)
DNA repair and recombination proteins [BR:
acaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABJ384_06270 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XBU16765
UniProt:
A0AAU7T042
LinkDB
All DBs
Position
complement(1259423..1262992)
Genome browser
AA seq
1189 aa
AA seq
DB search
MHFVHLGIHTEFSITESIVRISDLIKAAANDEMPALAITDLSNLHAAVKFYKKCLDKGIK
PILGSEIRLNDAEHRVTLLSMTNKGWRSLTELVSQGFISGQQLDIPCVQKDWILDQHQDL
IVLLGMQSDVGKMLITSNPDKAEPLLQEWIEKFGNRVYLALTRTNRPDEDAFIEEAVKLA
KKYNIGVVAHNDVHFITRDDFEAHEARVCIADGYVLGDNRRPKTYSPEQYFKTAVEMTEL
FSDIPTAIENTYHIAKRCNVTLRLGFNDLPDYPIPEGHTIDTYFAHLSEEGLEERLNFLY
PPEKRGEDWPEIRKPYDERLAFEVKIILDMGFPGYFLIVMDFIQWSKGNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVARTYGRD
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMIPTKPLGLSLEESLEAEPQLKDI
VTNPSNPDNDDAAEIWEMALKLEGITRNTGKHAGGVVIAPTKLTDYSAVMCDADGTNRVA
QFDKDDVEAAGLVKFDFLGLRNLTVIEDAIKHINARPDVTEPVNISYIPLDDKPAYEIFA
NANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLEKVLEPTYGIMVYQEQVMQAAQFCAGYSLGGADLLRRAMGKKKPEEMVKQRQIFIK
GAAEKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYQTAWLKAHYPAEFMSAVMTS
EMQNTDNIVFLIDDCRINGLEVLPPSINMSLYNFHASSPNTIVYGLGAIKGVGEAAMQSV
IDSRIQDGPYKDLFDFCHRVDLKKINKRTLEALIRAGAMDCLGIERADLMAQLPEAVQAA
EQARSNRETGMMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRPE
LKSFIPARINELTPTRRGVTTVFAGLVVDVANFPNRMMVTLDDGTARIEVSANHERFQRF
KDIIQNEKVVVIEGEIYEREGFDRPMGRLTKAFSLNEIRQKRANSIQIKLNAEHLNPSLS
QDLRKILTPFCNVDMCNHIPMQLHIDYSYASADINLGLNWKVAPLDELLTKLRDYFGKDV
IHIEYQVKSKAAKAVSYEQAMPANVPPPPANVSMDEAMDMYQAEATQYS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcactttgttcatcttggtatacatacagaattttccattacagaatctatcgtacgt
atatctgatctaattaaagctgctgcaaatgatgaaatgccagcactggccattaccgac
ctgtccaacctgcatgctgcggtaaaattctataaaaaatgtctggataaaggcattaaa
cctattttaggttcagaaatccgcctgaatgatgctgaacatcgtgtgacattattgtcc
atgaccaataaaggctggcgcagtctgaccgaactggtttctcaaggttttatttcaggt
cagcaactcgatattccttgtgtgcaaaaagactggattttagatcagcatcaagacctg
attgtgctattgggcatgcaatctgatgtcggcaaaatgctgatcacatcaaatccagat
aaagctgaacccctccttcaagaatggattgaaaaattcggtaatcgggtttatttggct
ttgactcgtaccaatcgccctgatgaagatgcctttattgaagaagccgtcaaacttgca
aaaaaatacaatattggcgtggtcgcccataacgacgtacacttcattacacgtgatgat
tttgaagcgcatgaagcccgggtctgtattgccgatggttatgtattaggtgataaccgc
cgtcctaaaacctatagccctgaacagtactttaaaactgctgtggaaatgactgaacta
ttttcagatattccaacagccattgaaaatacctaccacattgccaagcgttgtaatgtg
actttacgcttaggttttaatgacttgccagactacccgattccggaaggtcataccatt
gatacctactttgcacatttatctgaagaaggtctggaagaacgtttaaatttcctttat
ccgcccgaaaagcgcggtgaagactggccggaaattcgcaaaccctatgatgagcgttta
gccttcgaagtgaagattattctcgacatgggtttccccggttacttcctgatcgtgatg
gactttattcaatggtccaaaggtaacggtgtacctgtcggcccgggccgtggttcaggt
gccggttcactggtggcgtatagcttaaaaattaccgatctggatccactgcgttacgac
ctgctgttcgaacgtttcttgaacccggaacgtgtgtcgatgcccgactttgacgtcgat
ttctgtattgccggtcgtgaccgcgtaattgactatgtggcacgtacttatggccgagat
gcggtatcacagattgccactttcgggaccatggcggccaaaggtgcaattcgggacgtg
gcgcgtgttttaggtaaatcctatggtctggcggaccgtatttccaaaatgattccaacc
aagcccttgggtttgagtctggaagaatcgctggaagctgagccgcagctcaaggatatt
gtcaccaatccgtccaacccggacaatgacgatgccgctgaaatctgggaaatggcactc
aaacttgaaggcattacccgaaataccggtaagcatgccggtggtgtggtaattgcaccg
accaagctgaccgactactcagctgtaatgtgtgatgccgatggaacgaaccgtgttgcc
cagttcgataaggacgatgtcgaagcagccggtctggtcaaattcgacttcctgggtctg
cgtaacctgaccgtgattgaagatgcaattaagcatatcaatgcgcgcccggatgtgact
gaaccggtcaatatttcctatattccactggacgataaaccggcctacgaaatctttgcc
aacgccaataccactgcagtattccagtttgaatccgtcggcatgaaaaagatgctgaaa
gaggcacgcccaagtaaatttgaagaaattattgccttcgtatccttgtaccgtccgggt
ccaatggatctgattccagactttattcatcgtatgcatggcggtgagtttgaatacctg
catccattactggaaaaagttctggaaccgacctacgggatcatggtgtatcaggaacag
gtaatgcaggcggcacagttctgtgccggttacagtctgggtggtgcggatttgctgcgc
cgtgccatgggtaagaaaaaacctgaggaaatggtcaaacagcgccagatctttattaaa
ggtgctgctgaaaaagatattgatgaagcgaccgccaaccatatcttcgactatatggaa
aaatttgccggttatggtttcaacaaatcgcatgctgctgcctatgccctggttgcttat
cagaccgcctggctaaaagcgcattatcctgcagaattcatgtccgcggtgatgacctcg
gaaatgcagaacaccgacaacatcgtgttcctgattgatgactgccgtatcaatggttta
gaggttcttcccccatctatcaatatgtccttatataacttccatgccagcagtccgaat
accattgtctatggtttaggtgcaattaaaggcgtgggtgaagctgcaatgcagtcggtg
attgattcacgcatacaggatggtccttataaagatttgtttgatttctgccaccgtgta
gatttgaaaaaaatcaataaacgtacccttgaagcactcatccgtgcaggtgcgatggac
tgtttgggcattgaacgtgctgacctcatggctcaacttcctgaagcagttcaagctgca
gagcaggctcgctctaaccgtgaaaccggtatgatggacctgtttggtgaagttgaggaa
gttcagcgcaaaccagccaaaccggtcaaaccgtggtcagatgaagtccgcctcaaaggt
gaaaaagacaccttgggactgtacttgaccggacatccgattgatgtgtatcgtccggaa
cttaaatcctttattcctgcacgtattaatgaactcacccctacacgccgtggtgtgact
accgtatttgccggtctggtggtcgatgtcgccaacttcccgaaccgtatgatggtcact
ctggatgatggcactgcacgtatagaagtctcggctaatcatgaacgtttccagcgcttt
aaagacattattcaaaatgaaaaagtggtggtgattgaaggcgaaatttatgaacgtgaa
ggttttgaccgccctatgggacgcctgaccaaagcctttagcctgaatgaaatccgtcaa
aaacgtgccaacagtattcaaatcaagctgaacgcggaacatctaaacccttcactcagt
caagatttacgcaaaatcttaacgccattctgtaatgtcgatatgtgcaatcatatcccg
atgcaattacacattgattattcctatgcctctgctgatatcaacctgggcctgaactgg
aaggtggctccactagatgagttactgacgaaattacgtgactattttggtaaagacgta
attcatattgaatatcaggtcaaatccaaggcagccaaagctgtgagttatgagcaggcc
atgcctgcgaatgtcccgccgcctccagccaatgtgagcatggatgaagcgatggatatg
tatcaggctgaagccactcaatattcttaa
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