Acinetobacter sp. A1-4-2: ABJ384_13215
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Entry
ABJ384_13215 CDS
T11518
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
acaz Acinetobacter sp. A1-4-2
Pathway
acaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABJ384_13215 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acaz03400
]
ABJ384_13215 (recD)
Enzymes [BR:
acaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABJ384_13215 (recD)
DNA repair and recombination proteins [BR:
acaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABJ384_13215 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
UvrD-helicase
AAA_11
SH3_13
NAT10_TcmA_helicase
AAA_22
ResIII
SLFN-g3_helicase
PhoH
DEAD
T2SSE
Flavi_DEAD
nSTAND3
AAA
RuvB_N
PIF1
NPHP3_N
AAA_16
AAA_7
AAA_24
Motif
Other DBs
NCBI-ProteinID:
XBU15390
UniProt:
A0AAU7SWR3
LinkDB
All DBs
Position
complement(2732877..2734640)
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AA seq
587 aa
AA seq
DB search
MENKQYKDDQSAAWISTWSQFIRQQPFSHVPQDEDSSDIIEQVLQAVQHGDSCISATRQQ
ADRLHDLVVLAENVEQNIAPFVFDQQHLYLYRYWAMEQSLAQQVARLKQQTIAAVDLAAY
PDLLTDPYQIQALQMVAKQALNIITGGPGTGKTYTLARIIAVLNQAMPNIRIAMAAPTGK
AAQRMKEALQNSLNDEKLQGLVTDELKQLNPITIHRLLGLGSSYQPRFHAQQPLPYDVIV
VDEASMLDLSLANMLLSAVPDQARLILLGDADQLAAVDVGAVLADLQNVPALAENRVHLV
NSRRFEAGALIGKMAKFIQAQEVTQNSGALLENFAQQVVTPGEIQAVSLQVDMADQIQLE
YFPAHLSRQFDRTAYYDKLMLGYHPYIEVLKSYLTADEPELWVPQVIKTFDDYRILAAIR
HGAFGLGQLNQQIEQRLLEVLSLQMSRQGDWYVGRPVMMTYNDYQLGLSNGDIGICFKRS
RDGQSQFEVYFPSLEKWVPATRLPKSIETAFVLTIHKSQGSEFTHTAVVLDEAAKNLLSK
ELLYTAITRAKKVVSVLADQEAFVQALTIKTIRKSGVLDKINNLLNC
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaataaacaatataaagatgatcaaagcgctgcatggattagcacttggagtcag
tttattcgccagcagccgtttagtcatgtaccgcaggacgaagatagcagcgatattatt
gaacaggttctgcaggcggttcaacacggcgacagttgtatttctgcaactcggcagcaa
gcggataggctgcatgatttagtggttttggctgaaaatgtcgagcaaaatatcgcgcct
tttgtttttgatcagcagcatttgtatctgtaccgttactgggcgatggagcagtctctg
gctcagcaagtggcacgtctaaaacagcaaaccattgcagcggttgatcttgcagcttat
cccgatttactcactgacccctatcaaattcaggctttgcagatggtggcgaagcaggca
ctgaatatcattactggcggaccgggaaccggaaaaacctataccttggcgcgaattatt
gccgtgctgaatcaggcgatgccgaatatccgcattgccatggctgcgccgaccggtaaa
gcggcacagcgcatgaaagaagcactacaaaattcactgaatgatgaaaaactgcaaggc
ttggtgacggatgagttaaaacagctgaatccgattaccattcaccgtttattggggcta
ggaagtagttatcagccacgctttcatgcccagcagcctttgccctatgacgtgattgtg
gttgatgaagcctcgatgttggatctcagtttggccaatatgttgttgtctgcggtgcct
gatcaggcacggttaattttattgggcgatgctgaccagctggctgcggtggacgtggga
gctgtactggccgacttacaaaatgtcccggctctggctgagaatcgcgttcatttagtg
aatagtcgccgttttgaagcaggggcattgattgggaaaatggccaaatttattcaggca
caagaagtcactcaaaatagtggtgcattattagaaaattttgcccaacaagtggttact
ccgggtgaaatccaggcagtgtcattgcaggttgacatggcggatcagatccaacttgaa
tattttcctgctcatctgtccaggcaatttgaccgaaccgcgtattacgacaaactgatg
ttgggctatcacccctatattgaagtgctgaaaagctatttaaccgccgatgaacctgag
ctttgggtaccacaggtgatcaagacttttgatgattaccgaattttggcggcaattcgt
catggtgccttcggtttaggtcagctgaaccagcagattgaacagcgcttactggaggtt
ttatcgttacagatgagcaggcaaggcgattggtatgttggtcgaccagtgatgatgacc
tataacgattatcaactgggtttgtcgaacggggatattgggatctgttttaaacgtagc
cgtgatggacagtcacagttcgaagtctattttccgagtttggaaaaatgggtacccgcg
acccgcttaccgaaaagtattgaaacggcatttgtactgaccattcataaatcacaaggt
tcggaatttacccataccgcagtggtattggatgaggctgcgaaaaatttactcagtaaa
gaattgctgtataccgcaattacccgtgccaaaaaagtagtgagtgtgctggctgatcaa
gaggcttttgtacaagccttaaccattaaaaccataagaaaaagcggagtattagataaa
attaataatttgctaaattgttaa
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