Acinetobacter baumannii ATCC 17978: A1S_0439
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Entry
A1S_0439 CDS
T00486
Name
(GenBank) DNA topoisomerase type I omega protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acb
Acinetobacter baumannii ATCC 17978
Brite
KEGG Orthology (KO) [BR:
acb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acb03032
]
A1S_0439
03400 DNA repair and recombination proteins [BR:
acb03400
]
A1S_0439
Enzymes [BR:
acb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A1S_0439
DNA replication proteins [BR:
acb03032
]
Prokaryotic type
DNA Topoisomerases
A1S_0439
DNA repair and recombination proteins [BR:
acb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A1S_0439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_C_rpt
DUF7351
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
ABO10894
LinkDB
All DBs
Position
477188..479824
Genome browser
AA seq
878 aa
AA seq
DB search
MANTSRSASQSTASSASAAHKRALVIVESPAKAKTINKYLGSQYIVKSSVGHVRDLPTGG
SKATEKKPAARTKLTEAEKEQKANQALINRMGVDPEHGWQAHYEVLPGKENVVAELKKLA
KDADAIYLATDLDREGEAIAWHLREVIGGDDSRYHRVVFNEITKNAIQEAFKQPTRLDLN
RVNAQQARRFLDRVVGFMVSPLLWEKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYW
QVFADTKAKKDDIRLEAVKQAGKTLKLKNKAETDALLDVLKGAEYKVAQREDKPTKVNPS
APYITSTLQQAASTRLGFSVKKTMMLAQRLYEAGFITYMRTDSTFLSDDAVSMVRAHIES
QYGEKYLPAKPNRYGNKAGAQEAHEAIRPSNVALTGDQLAGVERDAQRLYDLIWRQFVAC
QMTPAEYLSSTLTVEAGNVELKAKGRTLVFDGFTKVRGANKSDDDIILPAIKVGEILKLE
KLDPSQHFTKPPARFTEASLVKELEKRGIGRPSTYAAIISTIQERGYVKLENRRLFAEKM
GEIVTDRLDESFNNLMNYAFTADLEGQLDRVATGERNWKELLDTFYGDFKKRLTNAQGEQ
GMRRNQPVEVPAVHCPECSRPMQIRTGTTGVFLGCSGYNLPPKERCKGTLNLTPVESLAA
LSDDDSAETADLMSKHRCPKCGTAMDSYVIDGGRKLHVCGNNPDCDGYELEEGEFKIKGY
DGPTIPCDKCDGEMQLKTGRFGPYFACTSCDNTRKVLKNGQPAPPRVEPIKMEHLRSTKH
DDYFVLRDGAAGLFLAASKFPKIRETRAPKVAELRSVADQLDPKYQFILQAPDVDPEGNP
TIVKFSRKNQSQYVGSETPEGKQTKWSLIYQDGKWIEG
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatacctcgcgctctgcatctcaaagcacagcatcttctgcctctgctgcacat
aaacgtgccttagtgattgtggagtcgcctgccaaagcgaaaaccatcaacaaatattta
ggttcgcagtacattgttaagtcttctgtaggtcacgtacgtgacttgccaacaggcggc
agtaaagcaacagagaaaaagccggctgcccggaccaaactcactgaggctgaaaaagaa
caaaaagcgaatcaggctttaatcaatcgtatgggcgtcgatccggaacatggatggcaa
gcgcattacgaagttctgcctggcaaagaaaatgttgttgctgaactcaagaaacttgct
aaagatgcagatgcaatctatctcgcaacggacttggatagagaaggggaagcaatcgct
tggcacttacgcgaagtgattggtggtgacgatagccgttatcatcgtgtggtatttaac
gaaattactaaaaatgccattcaagaagcatttaaacagccaacacgtctcgacttaaac
cgtgttaatgcacaacaagcacgtcgtttcttggaccgtgtagtaggcttcatggtttcg
ccattattatgggaaaagattgcccgtggtttatcggcaggtcgtgtacagtctgtagcg
gtaaagcttgttgttgaacgtgaacgtgaaattcgtgcttttattccagaagaatattgg
caagtctttgcagacactaaagctaaaaaagatgacattcgtcttgaggctgttaaacag
gcgggtaaaacgcttaaattaaaaaataaagctgaaacagatgccctgttagatgtatta
aaaggtgctgaatataaagttgcccagcgtgaagataaaccaactaaggtgaatccaagc
gccccatacatcacttcgactttgcaacaagctgcaagtacacgtttaggtttctctgta
aagaaaaccatgatgttggcgcagcgcttgtatgaagctggtttcattacttatatgcgt
actgactcaacgtttttgagtgatgatgctgtaagtatggtacgtgcacatattgaaagc
caatatggcgaaaaatatttaccagctaagccaaatcgctatggtaataaagcaggtgct
caagaagcccacgaagctattcgtccatcaaatgttgcgctgactggtgatcaacttgct
ggtgtagagcgcgatgctcagcgtttgtatgatttaatttggcgtcagttcgtagcttgc
caaatgactccggcagaatatttatcttcaactttaacagttgaagctggcaatgtggag
ttaaaggcaaaaggccgtacgcttgtatttgatggctttactaaagttcgtggtgccaac
aaatctgatgacgatatcattttacctgcaattaaagtgggtgaaattttaaagctagaa
aagctagatccaagtcagcattttaccaaaccaccagctcgttttactgaagcatcttta
gtaaaagaacttgaaaaacgtggtattggtcgtccgtcgacttatgctgccattatttct
acgattcaagaacgtggttacgttaagttagaaaatcgccgtctctttgccgagaaaatg
ggtgagatcgtaacagatcgtcttgatgaaagttttaataacctaatgaattatgcattt
acagcagatttagaaggtcagttggaccgtgtagcaacgggtgagcgtaactggaaagaa
ttgttagacacattctatggtgattttaaaaagcgtttgaccaatgctcaaggtgagcag
ggaatgcgtcgtaatcagccagttgaagtaccagcagtacattgccctgaatgttcacgt
ccaatgcagattcgtacgggcactacaggcgtattcttagggtgttcaggctataacttg
ccacctaaagaacgctgtaaagggaccttgaacttaacgccagttgagtctctagcagcg
ttatctgatgacgatagtgctgaaacagcagacttgatgtcaaaacatcgttgtccgaaa
tgtggcacggcaatggatagttatgtcattgatggtggtcgtaagttacatgtttgtggt
aacaacccggattgcgatggctatgagcttgaagaaggcgagttcaagatcaaaggttat
gatggcccaaccattccatgtgataaatgtgatggtgaaatgcagcttaaaactggccgt
tttggtccgtatttcgcttgtacaagctgtgacaatactcgtaaagtcttgaaaaatggt
caacctgcaccaccacgtgtagaaccaatcaagatggaacacttgcgttcaaccaaacat
gatgattattttgtgttacgtgatggcgcggctggtctgttcttggctgcaagtaagttc
ccgaaaattcgtgaaacacgtgcaccaaaagttgctgagcttcgtagcgtagctgatcaa
cttgatccaaaataccagtttattttacaagctccagatgtagacccagaaggtaaccca
accattgtgaagtttagtcgtaagaaccaatcacaatatgtgggttctgaaacaccagaa
ggtaaacaaactaaatggagcctaatttatcaagacggtaaatggattgaaggctaa
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