Acinetobacter baumannii ATCC 17978: A1S_0682
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Entry
A1S_0682 CDS
T00486
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
acb
Acinetobacter baumannii ATCC 17978
Pathway
acb02020
Two-component system
acb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
acb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A1S_0682
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A1S_0682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acb03021
]
A1S_0682
Transcription machinery [BR:
acb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A1S_0682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
CggR_N
Motif
Other DBs
NCBI-ProteinID:
ABO11126
LinkDB
All DBs
Position
812666..814114
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AA seq
482 aa
AA seq
DB search
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESLAESLS
TLEHKETDDLTTELNADHLPDDLPVDTEWDDIYTHQSTALGTPEFEEREDNRQVHLTLKE
HILEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAELEEIILAVQHLLSEMDIDEEVEEDE
VLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPRETEYLKEARSLLQYYELLIANDLNKL
LKQTGLSKEQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMP
KLRINSFYSSMIRRADQSDDNLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFL
EIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRGLFELKYFFSSHVGTTTGGEA
SSTAIRAMIKKLVSNENPRKPLSDNAIAALLKEEGIEVARRTVAKYRESLHIPSSSERKV
LI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatctgttggattgaaagttgcgaattcattatcgttaacgcctcaattgcag
caggcaatccgtttactacaactttctagcctagagttagagcaagaaattcaaattcaa
ttagatagtaatccattacttgaaaaagtagaagatgaatcactagcagaaagtttatct
actttagaacacaaagaaactgatgatcttacaacagagttgaatgctgatcacttacct
gatgacttgcctgttgatactgaatgggatgacatttatacacatcaatccactgctttg
ggtactcctgagttcgaagagcgtgaagataatcgccaagttcacctgacgcttaaagaa
catattttggagcaagtgaacttgctgcatttttcaaaaatagatcagttgattgcttat
tgcatagttgatgctttagatgataaaggttttctggatgctgaattagaagagattatt
ttggcagtacagcatttattaagtgagatggatatagatgaggaagtggaagaggatgaa
gttttagtagttttaaaacatattcaacgtcttgatccaattggtattggagctcgtaat
ttagctgaatgtttaaaagttcagttggagttcttgcctcgagaaactgaatatttgaaa
gaagccagaagtctacttcaatattacgaattactgattgcgaatgatcttaataaatta
ttgaagcaaacagggctttccaaagaacaattaaaatttgcagttgatttattaaaaaca
ttaaagccttatccaggcatggattttgaaaagcaagaatcagaatatcaaattcctgac
gtagtcgttgccaagaaggacttgcattggcaagttcagttaaatcctgatgtgatgcca
aaattaagaatcaattctttttattcgagtatgattcgtagggcagatcaaagtgatgat
aatttatacctacgtaatcaaatgcttgaggctaaaaattttataaaaagtattgatgaa
cggcacaaaacattattaaaagttgcgacttgtattgttgagcatcaaaaagcatttctt
gaaataggtcccgaagcaatgaaacccttagtactaagggatgttgcagaagaagtagaa
ttacatgagtcgaccgtttctcgcgttaccacaaataagtatatgcttactccacgtgga
ctttttgagttgaaatacttcttttctagtcatgtggggacaaccacaggaggtgaggct
tcttctaccgcaattcgggcgatgattaaaaagttagtttctaatgaaaatccgcgtaaa
cctttgtctgataatgcaattgctgctttattgaaagaagagggaatagaagtagctaga
aggactgtagcaaaatatagagaatcgttacatattccatcgtcatccgagagaaaagtc
ttgatctaa
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integrated database retrieval system
