Acinetobacter baumannii ATCC 17978: A1S_1206
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Entry
A1S_1206 CDS
T00486
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
acb
Acinetobacter baumannii ATCC 17978
Brite
KEGG Orthology (KO) [BR:
acb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acb03019
]
A1S_1206
Enzymes [BR:
acb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A1S_1206
Messenger RNA biogenesis [BR:
acb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A1S_1206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ABO11636
LinkDB
All DBs
Position
1409578..1412397
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AA seq
939 aa
AA seq
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MAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARSVSQRIAEEVGEKLGESIGFK
IRFNEQGSQDSIVRLMTDGILLAELGNDRFLSKYDTIIIDEAHERSLNIDFIMGYLKQLL
PKRPDLKVIVTSATLDVNRFSNYFNNAPIFEVEGRSYPVEVRYRPISEMNIGGSDDDEFD
DFEENLPRAVVQAVEECFADAEEKGHPEHADILIFSSTEQEIRELQETLQKYGPRHTEIL
PLYARLAVSEQQKIFSPSGKGRRIIIATNVAETALTVPNIRYVIDSGFARISRYNYRSRV
QRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFLSRPEFTEPEIKRTNLASVILQM
QSLGLGELENFDFIEPPDFRLVNDGRKLLIELGALNEKKNELTKVGQMMARMPIDPRLAR
MIVGGAHFGVLKEILVVVSALAVQDARERPADKQMQADQKHALFKEADSDFLFYLKLWDT
LNPKGEAGMSENKRRQFAKQHFLSWLRLREWKQTHQQLVELAEGLKLSFNEKPANYENLH
RALLTGLLSFIANKTDERNTFMAVRQQKAKVFPASTLHKTNTAWVMAFEMVETSQVYLRT
LAKIDPEWILLAARDLLKYHYFEPHWSKKAGIVNAYAQISLFGLIIEPKRLVNFEKVDQP
AAHEIFLRDALTTGNLGTVPPFLKHNLLKLEEVERVEDKLRRRDLVVDEETIYQFYASKI
PEEIASRRSFEDWRATVEAKNPRYLYVEDDALWLNDRPTTQQFPDHLHNGQLRLATTYRF
DPSHDEDGATVQIPVQALPQVDENIWSWGIPGWRLDLIEALLKALPKDKRRNLVPIPDTA
RKLMQGIDAVHLRQHIFSYLAFALRGEQITEKDFSFERIDPYLVPFIKVIDEKGKLIAKG
RDLAELKARCRVETHRPVKQQKGEFKTFPETLPLKLHRR
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggtgaaacaggttcagggaaaactactcagctccctcaaattgcaatgttagca
gggcgtggcttgactggtatgattggtcatacccagccacgtcgtttagctgcacgtagt
gtgtcgcagcgtattgcagaagaagtcggcgaaaagctcggcgaatcgattggttttaaa
atccgttttaatgaacaaggctcgcaagattcgattgtccggttaatgaccgacggtatt
ttgcttgccgagttaggcaatgaccgcttcttgtctaaatatgacacgatcattattgat
gaagcgcatgagcgctcactcaatatcgattttattatgggttatttaaagcagttactg
ccaaaacgcccagatttaaaagtcatcgtgacttcggcaactttagatgtaaatcgtttt
agtaactactttaataatgcaccaatttttgaagtagaagggcgtagttatccggttgaa
gtgcgttatcgcccaatttcagaaatgaatattggtggtagtgatgacgacgagttcgac
gactttgaagaaaacctgccgcgtgcagtcgttcaagctgtagaagaatgctttgctgat
gccgaggaaaaaggccatccagaacatgcagatattctgattttctcaagcacagagcaa
gaaattcgagaattgcaggaaaccttacaaaagtacgggccgagacataccgaaatttta
cctttgtatgcgcgtttagccgtttctgagcaacaaaagatttttagcccaagtggaaag
ggccgccgtattattattgcgacgaacgttgcagaaactgcactgactgttcctaatatt
cgctatgtgattgatagcggctttgcacgtatatctcgttataactaccgttcacgcgtg
caacgcttaccaattgaggcaatttcacaagctgcagcaaatcaacgtaaaggacgttgt
ggtcgtgttgctccaggtgtgtgtattcgtttatatagcgaagaagactttttaagtcgt
cctgagtttaccgaacctgaaattaagcgaaccaacttagcatcggttattctgcaaatg
cagagcttaggtttaggtgagctggaaaattttgatttcattgagccgccagatttccgt
ctagtcaatgatggtcgtaagctactcattgagttaggtgcgctgaacgagaagaaaaat
gaactgaccaaagtcggccaaatgatggcacgtatgccgattgatccaagactcgcacgt
atgattgtgggtggtgctcattttggtgtactcaaagaaattttggtggtggtcagtgca
cttgcagttcaagacgcgcgtgaacgtccagcagataaacaaatgcaagctgatcaaaag
catgcactattcaaagaggcagattcagattttctgttttatttaaaactttgggatact
ttaaatcctaaaggtgaagcaggaatgtcggaaaataagcgtcgtcaatttgctaagcag
catttcttaagctggttacggttacgtgaatggaaacagacacaccagcagctggttgag
ctggccgaaggtttaaaacttagttttaatgaaaagcctgcaaattatgaaaacttgcac
cgtgcgttgctaacaggtttattgtcttttattgccaataagactgatgaacgtaatacc
tttatggcagtacgtcagcaaaaggcaaaagtttttccagccagcacattgcacaaaacc
aatactgcgtgggtgatggcttttgagatggtggaaacctctcaagtctatttacgtaca
ttagcaaaaattgatcctgaatggattttgcttgctgcacgcgacttattgaaatatcac
tatttcgagcctcattggtctaaaaaagccggtattgtaaatgcttatgcacaaatttca
ttgtttggtttaattattgaaccgaagcgtttggttaattttgagaaagttgaccaacct
gctgcacatgagattttcttacgtgatgcattaaccacaggaaatctggggacagttcca
ccatttttaaaacacaacttgcttaaacttgaagaagtagagcgagttgaagataaatta
cgtcgccgcgatttggtggtcgatgaagaaacaatttatcagttctatgcgtcgaaaatt
cctgaagaaattgcgagtcgtcgtagttttgaagactggcgtgcaactgtagaagcaaaa
aatccacgttatttatatgtagaagatgatgcgctttggctcaatgaccgtccgaccacg
cagcaattccctgatcatttacataatggtcagttacgtttggcaactacttatcgcttt
gacccaagtcatgatgaagatggcgcaacggtccaaattccggtacaggcattgcctcag
gtagatgaaaatatttggtcgtgggggattccaggctggcgtttagatctcattgaagcc
ttattgaaagccttaccaaaagataaacgtcgtaacctcgtaccgattccagatacggcg
cgtaagctcatgcaaggtattgatgctgtacatttgcgacaacatatctttagctatctg
gcatttgctttacgtggtgagcagattacggaaaaagatttttcatttgaacgcatagat
ccgtatttggtgccttttattaaggtgattgatgaaaaaggtaaattgatcgccaaaggc
cgtgacttggctgagttgaaggctcgttgtcgcgtagaaacgcatcgtccggtgaaacag
caaaaaggtgaatttaaaactttccctgaaactttacctttgaagcttcacagaaggtga
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