Acinetobacter baumannii ATCC 17978: A1S_2260
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Entry
A1S_2260 CDS
T00486
Name
(GenBank) ATP-dependent RNA helicase (DEAD box)
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
acb
Acinetobacter baumannii ATCC 17978
Pathway
acb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A1S_2260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acb03019
]
A1S_2260
Enzymes [BR:
acb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A1S_2260
Messenger RNA biogenesis [BR:
acb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A1S_2260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
ERCC3_RAD25_C
Cas3-like_C_2
Glyoxalase
CMS1
YtzH
FACT-Spt16_Nlob
Motif
Other DBs
NCBI-ProteinID:
ABO12683
LinkDB
All DBs
Position
complement(2620921..2622072)
Genome browser
AA seq
383 aa
AA seq
DB search
MTSGFETLNLHPQLKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLIS
VINDLLNNPVQEQRFRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDK
QKKQLDANFVDIMVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRY
SPRKEQRQTLMFSATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAKQDKYR
LLQDILREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQG
KHNIMIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDA
FYLPEIEKAIGKKLPLTRLDGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacatctggttttgaaaccttgaatttacatccgcaacttaaaaaggcgattgatgct
ttagggtttactcaaatgaccccaattcagcaaaaggttttaaaatatacattagccggg
catgatgcaattgggcgagcacagacaggaacaggtaagactgctgcctttctgattagt
gtaattaatgatttgctcaataatccggttcaggagcaacgcttccgtggtgagcctcgt
gctttaatcttagcacctactcgtgagttggcattgcagattgaaagtgatgcaaaatct
ctcacaaaattttctaatttacacctagtgaccctattaggtggcgttgatttcgataag
cagaagaagcaacttgatgctaattttgtcgatatcatggttgccacaccagggcgttta
attgattttgtagaacaaaaagaagtttggctcgatcaaattgaatttttagtgattgat
gaagctgaccgtttattggatatgggctttattccttcggtaaaacgtattgtgcgttat
tcaccacgtaaggaacaacgacaaaccttaatgttctctgcaacatttagttatgatgtc
ttgaacttggcaagacagtggttatttgaaccagtaactgttgaaattgaacctgaacaa
aagaccaataatgatgtcgaacaacgtgtttacgttgtggctaaacaggataaatatcgt
cttttacaagatattttacgtgaagagccaattgataaagttatgatctttgccaatcgc
cgtgatcaggtacgtcgtctttacgaccatttgaaaaaagatggatacaaagtggggatg
ctatctggtgaaattgctcaagataaacgtttaaaaatgttggagcagtttaagcaaggc
aagcataacatcatgatcgcaaccgatgttgctggtcgtggtattcatgtagacggcgta
tcacatgtagtgaattttacattgcctgagcagtctgatgattatgtccatcgtattggt
cgtacaggtcgtgcaggggcacaaggggtaagtattagtttcttatctgaagatgatgct
ttctatttacccgaaattgaaaaagcaattggtaagaaattgcctctaacccgactagat
ggttattgctaa
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