Acinetobacter baumannii ATCC 17978: A1S_2839
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Entry
A1S_2839 CDS
T00486
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
acb
Acinetobacter baumannii ATCC 17978
Brite
KEGG Orthology (KO) [BR:
acb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acb03016
]
A1S_2839
Enzymes [BR:
acb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
A1S_2839
Transfer RNA biogenesis [BR:
acb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
A1S_2839
Prokaryotic type
tRNA splicing ligases
A1S_2839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
ABO13245
LinkDB
All DBs
Position
3286068..3287273
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AA seq
401 aa
AA seq
DB search
MGIQKILNEEAQYGVPVKIFTQDIDSESIEQLKKMAQLQFIYPHIAVMPDVHVGKGATVG
SVIPTKHAIIPAAVGVDIGCGMNAIRLSLKASQLPDNLSRLRDAIERKVPVGFALHKQVK
AKASSIIPLEKRLEPIIKKHPGLVRMLRQFEATWQKQLGTLGGGNHFIELCIDENQDVWV
MLHSGSRGLGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAEGSQSFNDYVEAVEWAQEY
AFENRKEMMRLILEAIRPLLPSFQMTKEAINCHHNYVSQETHFGENLFVTRKGAIRAGLD
ELGIIPGSMGARSYIVKGKANPESFCSCSHGAGRKMSRSKAKVLFNQQDLIEQTQGIECR
KDSGVVDEIPSAYKDIDEVIANQADLIEVIHTLKQVLCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaaaagatattaaacgaagaggcacaatatggtgtccccgttaaaattttc
actcaagacatagatagtgaaagtattgaacaactcaagaaaatggcacaactgcaattt
atatatcctcatattgctgttatgcctgatgtgcatgttggaaaaggtgcaactgtaggc
agcgtcattcctactaaacatgccattattccagctgcagtgggtgtagatattggctgc
ggaatgaatgctattcgtttgagcctgaaagcttcacaacttccagataacttaagccgc
ttgcgggacgccattgaacggaaagtgccggttggatttgctttgcacaaacaagtcaaa
gcgaaagcttctagcattattccacttgaaaaacgcttagaacctattattaaaaagcat
ccgggtcttgtccgaatgcttcgtcagtttgaggcaacatggcaaaaacagctgggcact
ttaggcggcggtaatcactttatagagttatgtattgatgaaaatcaagatgtatgggtg
atgctccattcaggcagccgaggtcttggtaacgtcataggtacttattttattgagtta
gccaagaaagaggcacaacatcgctttgggcacgtgcctgataaagatttaagttatttt
gctgaaggctcgcaaagctttaatgattatgtagaagcagtagagtgggctcaagaatat
gcttttgaaaatcgtaaagaaatgatgcgattaatattagaagcaattcgccctcttcta
ccttcttttcaaatgacgaaagaagcaatcaattgtcaccataactatgtgagtcaagaa
acacactttggtgaaaacctttttgttacaagaaaaggggcaattcgagcaggtttagat
gagttaggaattattccaggttctatgggagcacgctcgtatattgttaaaggtaaagca
aaccctgaatctttttgttcctgttctcatggagctggccgcaaaatgagccgaagcaaa
gcaaaagttctttttaatcagcaggacttgattgaacaaacacaagggattgaatgccgt
aaagacagtggtgtagtcgatgaaattccaagtgcctataaagatattgatgaggttata
gccaatcaggcagatctcattgaagtcatccatactcttaaacaagttttatgtattaaa
ggttaa
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