Acinetobacter baumannii ATCC 17978: A1S_3045
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Entry
A1S_3045 CDS
T00486
Name
(GenBank) exoribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
acb
Acinetobacter baumannii ATCC 17978
Pathway
acb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A1S_3045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acb03019
]
A1S_3045
03016 Transfer RNA biogenesis [BR:
acb03016
]
A1S_3045
Enzymes [BR:
acb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
A1S_3045
Messenger RNA biogenesis [BR:
acb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A1S_3045
Transfer RNA biogenesis [BR:
acb03016
]
Prokaryotic type
tRNA degradation factors
A1S_3045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
ABO13442
LinkDB
All DBs
Position
3531977..3534394
Genome browser
AA seq
805 aa
AA seq
DB search
MTKNWVDPEAKAEAERYDNPIPSRTLILDTLEQLQTPQSHAELVDHFHIQDQKSIEALSH
RLSAMVRDGQLMKDGFKFQLVADQPTYEATVYINSKGLGTAHIDGQDDLLLPERELRLVF
NGDRVRVRQTSVDRKGKPWGFITEVIQHRVKQLIGKLSVHDGEYFIQPNNPNQHQPIPLE
KELVEHAKANVGDMLRVAIDTYPTREEFATAHIIQSMADKADTEIIIPQTILEFGLPYEF
PDEVIKEAESFKEPAEKDREGRVDLRDLALVTIDGEDARDFDDAVYAEKRPGGGYRVVVA
IADVSHYVRLDSALNEEAEERGTSVYFPHFVLPMLPEALSNGLCSLNPHVDRLCMVCDLK
LSRTGRVTGYEFYPAVMHSKARLTYTQVGQYFEGATDAIPKDRDIHKSLNTLFQLYQILK
NLRVDRHAMEFETIETYMTFDELGGIKEILPRTRNDAHKLIEECMLLANVAAAEYALEHD
IPMLYRVHEAPEFSRIQKVKDFVKLLGLPFPDQPTQADYQKVIEATKDRIDAPSIHAVLL
RSMMQAYYGAKNAGHYGLAYEAYTHFTSPIRRYPDLLLHRAIKAHLKQKPYPLSGAALDD
AGEHFSQTERRADEASRSVTTWLKCHYMQQHLGDEFIGIVSAVTEFGLFVTLKDLYVDGM
IHISQLGDDFFIYDQASQNLIGQNRGQVFGLGDEVKIQVAGVNLEERKIDFQLIKQVTHA
GRVVRSRAPRTTKTSTQATEEVFGKPSVSTDGEKPVRKKKEKGKPSSYSKKSGKKTSTKA
EAKPEKVKKKAKPKKKKSNAKSKAD
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaactgggttgaccccgaagcaaaagccgaagctgaacgttatgacaatcct
attccaagccgtactcttattttagatacgttggaacaattgcaaacaccgcaatctcat
gcagaacttgttgaccattttcatattcaagatcagaaaagtattgaagccttaagtcat
cgcttaagtgctatggttcgtgatggccaacttatgaaggatggttttaagtttcagttg
gtggcagaccaacctacctatgaagcaactgtctatattaatagtaaaggtttgggtaca
gcacatattgatggtcaagatgatttgttattacctgagcgtgagttacgtttagtcttt
aatggtgatcgggtccgtgttcggcagacatcggtagatcgcaaaggtaaaccgtggggt
ttcattaccgaagttatacagcatcgtgtaaaacagttaattggtaaattgtcggtacat
gacggcgaatattttattcagcccaacaatccaaatcagcatcaacctatcccactagaa
aaagaattggttgaacatgctaaagcaaatgtcggcgatatgcttcgtgttgctatagac
acttacccaacccgggaagaatttgcaacggcacatattattcagtctatggcagataaa
gccgatactgaaattattatcccgcagaccattttagagtttggtttgccttacgaattt
ccagatgaagttataaaagaagctgaaagtttcaaagaacctgctgaaaaagatcgcgaa
ggtcgagttgatttaagagacttggcacttgtcacaatcgatggtgaagatgcgcgagat
ttcgatgatgcagtatatgcggaaaaacgtcctggtggtggttaccgagttgtcgttgca
attgccgatgtgagccattatgtacggttagattcggcattaaatgaagaagctgaagag
cgcggcacttcggtttatttcccacattttgttttaccaatgctaccagaagcattatca
aatggattgtgttcacttaacccacacgtagatcgtttatgcatggtctgtgacctaaaa
ctttctcgtacgggtcgtgttacaggttatgaattttatccggcagtcatgcattcaaaa
gcacgtttgacctatacacaagtaggacaatattttgaaggtgcaactgatgcaattcca
aaagatcgtgatattcataaatcgctaaatacacttttccagctttaccagattttgaaa
aacttacgtgttgatcgtcatgcaatggagtttgaaaccattgaaacttatatgaccttt
gacgagttaggtggaattaaagaaattttacctcgtacacgtaatgatgctcataagctt
attgaagagtgtatgttgcttgccaatgtagcagcagcagaatatgccttagaacatgat
attccgatgttgtatcgtgtacatgaggcacctgaattctcacgtattcaaaaagtaaaa
gattttgtaaaactattgggtttacctttccctgaccaaccaactcaggcagattatcaa
aaagttattgaggcaactaaagaccgtattgatgcgccaagcattcacgccgtgttatta
cgctcaatgatgcaagcttactatggtgccaaaaatgcaggtcactatggtctagcttat
gaagcttatacacatttcacttcaccaattcgccgctacccggacttattgttacatcgt
gcaattaaagctcatctaaaacaaaagccttacccactttccggtgcagctttagatgat
gcaggtgaacatttctctcaaacagaacgccgtgccgatgaagcatcccgcagcgtaacg
acttggttgaaatgtcactatatgcaacaacatttaggtgatgagtttattggtattgtg
agtgcggtaactgaatttggcctatttgttactcttaaagatctttatgttgatggcatg
attcacattagccaacttggcgatgatttctttatttacgatcaagcaagtcaaaacctc
attggacaaaatcgtggtcaagtcttcggtttaggcgacgaagttaagattcaagttgct
ggtgtaaatctagaagagcgtaaaatcgatttccaactcattaaacaagttactcatgct
ggacgtgtagttcgtagtcgtgctccacgcacaaccaaaacaagcacccaagcaacagaa
gaagtttttggtaaaccgtctgtatcaactgatggtgaaaaacctgtccgtaaaaagaag
gaaaaaggtaaaccaagctcatatagtaaaaagtctggtaagaaaacctctacaaaagca
gaggccaaaccagaaaaagtaaagaaaaaagcgaaacctaaaaagaaaaagtcaaacgcc
aagtctaaggctgactaa
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