Acinetobacter baumannii ATCC 17978: A1S_3295
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Entry
A1S_3295 CDS
T00486
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
acb
Acinetobacter baumannii ATCC 17978
Pathway
acb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A1S_3295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acb03400
]
A1S_3295
DNA repair and recombination proteins [BR:
acb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A1S_3295
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A1S_3295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_21
AAA_23
AAA_22
RsgA_GTPase
AAA_25
DnaJ_CXXCXGXG
nSTAND3
AAA_33
BCA_ABC_TP_C
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
ABO13684
LinkDB
All DBs
Position
3784100..3786934
Genome browser
AA seq
944 aa
AA seq
DB search
MSQSHIRIRGARTHNLKNVSLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLSQMEKPEVDSIEGLSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTP
YCPEHDLPMVAQTVSEMVDAVKNLEEGTALMLLAPVVRERKGEYSNLFEQLQGQGFVRAR
VDGEIIDIDTPPELDKKKKHTIEVVVDRFKVRDDLGNRIAESFETALRLGGDIAVLSWMN
GEHPDRVFSAKHSCPECDRAVAELEPRLFSFNNPFGACPVCDGLGTRSHFSPEKLIPNPE
LAISEGAIRGWDRQRPYYYSMLQKVADHFGFQLDTPWNQLDKDTQKKFLQGTGKEKIDLS
YIDERGRKHTRVQPFEGILPHLERRYRETESNYVRDDLAQYLSNAACDACGGSRLNEISR
HVRVKDKTIADITRMSIGDAESYYQGINLEGAKGEIADKIFKEIRERLHFLVSVGLNYLS
LARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLIRLRDLGN
TVLVVEHDEDAIRAADHIIDIGPGAGVHGGVVIAEGTYDELAKHADSLTGQYLSGKLKIE
VPKQRTQPPKPEEKIKLSGAAGHNLKNVDLTIPLGIMTCVTGVSGSGKSTLINRTLLPLA
ATQLNGATTLTAEKFDSIDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAQT
PEAKARGYSAGRFSFNVKGGRCEACEGDGMIKVAMHFLPDMYVPCDACHGKRYNRETLEV
GYKGKNISDVLEMTVEDAAEFFSAIPVIHRRLETLTQVGLGYIRLGQAATTLSGGEAQRV
KLARELAKRDTGKTLYILDEPTTGLHFHDIAKLLDILHELRNKGNTIVVIEHNLDVIKTA
DWVVDLGPEGGSGGGMIIAEGTPEQVAEVEISHTGRFLKPMLKQ
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagtcatatccgtattcgaggcgcacgtacccataacttaaaaaatgtgtca
ctcgatattccacgcgacaaatttgtggtaattacggggctatcaggttcaggaaaatct
tctcttgccttcgataccttgtacgccgaaggacaacgccgttatgtcgaatcactttcg
gcatatgcccgtcagtttttatcgcaaatggaaaaacctgaagtcgactcgattgaagga
ttatcaccagccattgcgattgagcaaaagtctactagccataacccacgttcaacggtt
ggtacgattaccgaaatttatgactatttgcgtctgctttatgcacgtgtcggtacgcct
tattgccctgaacacgacttacctatggttgcgcaaactgtttctgaaatggtcgatgcg
gtaaaaaaccttgaggaaggcactgcactcatgttgcttgcccctgttgttcgtgagcgt
aaaggtgaatacagcaacttgttcgaacaactacaaggtcaaggtttcgttcgtgcccgt
gttgatggtgaaatcattgatattgatacaccaccggaactcgacaaaaagaaaaaacat
accattgaagtcgttgttgaccgctttaaagtacgtgatgacttaggcaaccgtattgct
gaatcatttgaaactgcactgcgtttaggtggcgatattgcagttttatcgtggatgaat
ggcgaacacccagatcgcgttttttctgcaaaacactcatgccctgaatgtgatcgcgca
gtcgcagagcttgagccacgtttattttcatttaacaacccgtttggtgcgtgccctgtc
tgtgatggcttaggtacacgtagccatttcagtcctgaaaaactcattcctaaccctgag
ctggcaattagtgaaggtgctatccgtggttgggatcgtcaacgtccttattactattca
atgctgcaaaaagttgccgaccatttcggttttcaactggatacaccttggaatcagtta
gataaagacacgcaaaagaaattcttacaaggtactggcaaagaaaaaatcgatttaagt
tatatcgatgaacgcggccgtaaacatacacgcgtgcaaccttttgaaggaattttgccg
caccttgaacgtcgctatcgtgaaactgaaagtaactatgtacgtgatgatttagcacaa
tatttgtctaatgcagcttgtgatgcatgtggcggttcacgtctcaatgaaatttcacgt
catgttcgtgtaaaagacaaaaccattgccgacattactcgcatgtcgattggagatgcc
gaaagttactatcaaggtataaaccttgaaggtgccaaaggtgaaattgcagataaaatc
tttaaagagattcgtgagcgtttacatttcttggtgagtgttggcctgaactatttaagt
ctggctcgctctgccgaaacactatcgggtggtgaagcccagcgtatccgtctagcttcg
caaattggtgcaggtttgatgggtgtcatgtacgtccttgatgaaccatcaattggtctc
catcaacgtgataatgaccgtttattacaaacgttaattcgcttacgtgatttgggcaat
acggtattagtcgttgaacatgatgaagatgcaatccgtgcagctgaccatattattgat
atcggccctggtgctggtgtgcatggtggcgttgtcattgctgaaggtacgtatgatgag
ctggctaaacatgccgactcgcttacaggtcaatatctttcaggcaaactcaaaattgaa
gtgccaaaacagcgaactcaaccacctaaacctgaagaaaaaattaaactttcaggtgca
gcgggtcataacttaaaaaatgtcgatttaaccatcccacttggcattatgacttgtgtc
acgggtgtttcaggttcaggtaaatcaacactgattaaccgtacgttactcccattggct
gcaacacagctcaacggtgcaacgaccttaacagctgaaaagttcgactcgattgatggt
ctacaacatctggacaaagtcgttgatattgatcaaagtccaattggacgtactccacgt
tctaaccctgcaacgtatacagggttatttacgccaattcgtgagttatttgctcaaaca
ccagaagcgaaagctcgtggttatagtgcgggtcgtttctcgtttaacgtaaaaggcgga
cgttgcgaagcgtgtgaaggcgacggtatgattaaagtcgcaatgcacttcttaccagac
atgtatgtaccttgcgatgcttgtcatggcaaacgctataaccgtgaaacacttgaagtc
ggctataaaggcaaaaacatttctgatgttttagaaatgacggttgaagatgctgctgag
ttctttagtgctattccagttattcaccgtcgtttagaaaccttaactcaggtaggtcta
ggctatattcgtttaggtcaggcggctactactttatctggtggtgaagcacagcgtgtc
aaactggctcgtgagttagcgaaacgtgatacgggtaaaacgctttatatcttggacgaa
ccaacaacaggtttgcatttccacgatattgccaagttactcgatattttgcatgagcta
cgcaacaagggtaataccattgtggtgattgaacataaccttgatgtcattaaaacagca
gactgggttgtcgacttaggccctgaaggtggttcgggcggtggtatgatcattgccgaa
ggtacacctgaacaagtagccgaggtcgagatttcccatactggtcgcttcttgaaaccg
atgttgaaacaataa
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