Acinetobacter pittii: BDGL_002230
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Entry
BDGL_002230 CDS
T01684
Symbol
cafA
Name
(RefSeq) ribonuclease G, endoribonuclease G (cytoplasmic axial filament protein)
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
acc
Acinetobacter pittii
Brite
KEGG Orthology (KO) [BR:
acc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acc03019
]
BDGL_002230 (cafA)
03009 Ribosome biogenesis [BR:
acc03009
]
BDGL_002230 (cafA)
Messenger RNA biogenesis [BR:
acc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BDGL_002230 (cafA)
Ribosome biogenesis [BR:
acc03009
]
Prokaryotic type
rRNA processing factors
BDGL_002230 (cafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
Motif
Other DBs
NCBI-GeneID:
11636754
NCBI-ProteinID:
YP_004996498
UniProt:
F0KN31
LinkDB
All DBs
Position
complement(2419127..2420536)
Genome browser
AA seq
469 aa
AA seq
DB search
MALIENGTVNELYVERTVKRGLVGNIYKGKVVRVLPGMQAAFVDIGLSRTAFLHINDMVW
PRSQPTPNVFELLHPGQTLTVQVMKDMLGTKGARLSTDLSIPSRYLVLMPYGNHIGVSQR
IESEEERDRLRNIIEGIQSEHNLPGSVIVRTAAEGVDEAEIAQDMCYLSKLWEYIQRKQT
DVAVPSLIFEELPLPQRIIRDLASEETAKIYVDSREIHAKLLEFVDEFVPNMKSRLIHYP
GERPLFDLYNVEEDIQKALQTRVALKSGGYLMIDQTEAMTTIDVNTGSYVGGRSLEDTVF
KTNMEATQVIARQLRLRNLGGILIIDFIDMQEATHREEVMRQFEKMLERDHAKTKITQVS
ELGLVEMTRKRTRESLEHLLCESCPTCQGRGFVKTAETVCYEIFREILRYTRAFESTSGF
TVVAHPSVIDRLLTAEAPAVADLEHFINRVIKFQVENLYTQEQYDIILS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtggcattaatcgaaaatggaactgttaatgaactgtatgtcgagcgtacagttaaacgc
ggtctagtcggcaatatctacaagggtaaagttgtacgagtgcttccgggcatgcaagct
gcctttgttgatattggtttgtctcgaacagcctttttacatatcaatgatatggtttgg
cctcgttcgcagcctaccccaaatgtctttgagctattacatcctgggcaaacccttact
gtccaagtaatgaaagatatgttgggcacaaaaggtgcacggctaagtacagatctttca
atcccttctcgctatttggttttaatgccgtatggtaaccatattggtgtttcgcagcgt
attgagtctgaagaagagcgagatcgactgcgtaatattattgaaggtattcaatctgag
cataatttacccggtagcgtgattgtccgtacggctgcagaaggtgtggatgaggcagaa
attgcacaggacatgtgctatctgagcaaattgtgggagtacattcagcgtaaacagacc
gacgttgctgttccttctttaatttttgaagaacttccattacctcaacgtattattcgc
gacttagcaagcgaagaaactgcaaagatttatgtagattcgcgagagattcatgcaaaa
ctgcttgagtttgtagatgaatttgtcccgaatatgaagagtcgtctcattcattatcca
ggcgagcgaccactatttgatctttataatgttgaagaagatattcaaaaagccttacaa
actcgcgtagctttgaagtcgggcggttatctgatgatcgaccaaactgaagctatgaca
acgattgacgttaatacaggttcatatgtaggtggtcgtagtcttgaagacacggttttt
aaaactaatatggaggcgactcaagttatcgcgcgtcaacttagactgcgtaatttgggg
gggattctgattattgattttattgacatgcaagaagccacccaccgtgaagaggtgatg
cgtcagtttgagaaaatgcttgagcgagatcatgctaagaccaaaattactcaagtgtca
gaacttggtctggtcgaaatgacgcgtaaacgaactcgtgaatcattagaacacttgtta
tgtgaatcatgtccaacatgccaagggcgtggttttgtcaaaacagcggagacagtgtgt
tacgaaatatttcgtgagatattacgttatacccgcgcatttgagtcaacgagtggcttt
actgttgttgcccatccttctgtgattgaccgattattaacagcagaagcaccagcagta
gccgatttagagcattttattaaccgtgttattaaatttcaggtcgaaaatttatatacg
caagagcaatacgatatcattttaagctaa
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