Acinetobacter pittii: BDGL_003192
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Entry
BDGL_003192 CDS
T01684
Symbol
rpoB
Name
(RefSeq) RNA polymerase subunit B
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acc
Acinetobacter pittii
Pathway
acc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BDGL_003192 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acc03021
]
BDGL_003192 (rpoB)
03400 DNA repair and recombination proteins [BR:
acc03400
]
BDGL_003192 (rpoB)
Enzymes [BR:
acc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BDGL_003192 (rpoB)
Transcription machinery [BR:
acc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BDGL_003192 (rpoB)
DNA repair and recombination proteins [BR:
acc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BDGL_003192 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
DOCK-C2
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
11637850
NCBI-ProteinID:
YP_004997460
UniProt:
F0KKQ1
LinkDB
All DBs
Position
3424775..3426232
Genome browser
AA seq
485 aa
AA seq
DB search
MQDGKTPKNREDIGLQAAFRSVFPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAA
PMRVKIRLIIKDRETKSIKDVREQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVF
FDHDKGKTHSSGKVLYSARIIPYRGSWLDFEFDAKDLVYVRLLATVVLRALGYNNEQILN
LFYEKVPVYLDMGSYQIDLVPERLRGEMAQFDIADNDGKVIVEQGKRINARHVRQMEAAG
LTKLSVPDEYLYERITAENITLRDGEVIAANTLLSHEVMVKLAEGGVKQFNILFTNDIDR
GSFVADTLRADTTAGREEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRM
KFNRRLGRPYEVGTDQKSREVEGILSHEDIIDVLRTLVEIRNGKGEVDDIDHLGNRRVRS
VGEMTENQFRVGLVRVERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFM
DQNNP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagatggcaaaactccaaaaaaccgcgaagatatcggtctccaagccgcatttcgt
tcagtttttcctatcgaaagttattctggcaatgctgctttagaatttgttgagtatagc
cttggtaaacctgagttcgatgtacgcgaatgtattcttcgtggttcgacttatgcggca
ccaatgcgcgttaaaattcgtttgattattaaagatcgcgaaactaaatcaattaaagac
gtacgagaacaagaagtctatatgggtgaaattccactcatgactgaaaacggtacattc
gttattaatggtactgagcgtgtaatcgtatctcaattacatcgttcaccaggcgttttc
tttgatcacgataaaggtaaaacccactcaagtggtaaagtgttgtattcagcacgtatc
attccttaccgtggttcatggttagactttgaatttgatgcaaaagacttagtttacgta
cgtttacttgctactgtcgtgttgcgtgcactaggttataacaacgaacaaatcttgaat
ttgttctatgaaaaagtacctgtgtatcttgacatgggcagttaccaaattgacctagta
cctgaacgtttacgtggggaaatggctcaatttgatattgctgataatgacggtaaagtt
attgttgagcaaggtaaacgtattaatgctcgtcacgtacgtcaaatggaagctgctggt
ttaacaaaactttcagttcctgatgaatacttatatgagcgtatcactgctgaaaatatt
actttgcgtgatggtgaagtaattgctgcgaatactttattaagccatgaagttatggtg
aagttggcagaaggtggtgttaaacagttcaatatcttgtttacgaacgatattgaccgt
ggttcgtttgttgctgacactttacgtgcagatacaacagctggtcgtgaagaagcatta
gttgaaatttataaagtaatgcgtccaggcgagccaccaacaaaagaagctgctgaaaac
ttattcaataacttattcttctcttctgagcgttatgacttatctccagtaggtcgtatg
aagttcaaccgtcgtttgggtcgtccatacgaagttggtactgaccagaagtcacgtgaa
gtagaaggtattttatcgcacgaagatatcattgatgtattacgtacattagttgaaatc
cgtaacggtaaaggtgaagtcgatgatatcgatcacttgggtaaccgtcgtgtacgttct
gttggtgaaatgactgaaaaccaattccgtgttggtttggtacgtgttgaacgtgctgtt
aaagaacgtttaagccaagcagaaacagataacttgtctccacaagatctaattaacgct
aaaccagttgcagctgcaatcaaagaattctttggttcaagccaattatctcagttcatg
gaccaaaacaacccataa
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