KEGG   Acinetobacter sp. C32I: NDN13_11005
Entry
NDN13_11005       CDS       T11916                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
accx  Acinetobacter sp. C32I
Pathway
accx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:accx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NDN13_11005 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:accx03021]
    NDN13_11005 (rho)
   03019 Messenger RNA biogenesis [BR:accx03019]
    NDN13_11005 (rho)
Transcription machinery [BR:accx03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     NDN13_11005 (rho)
Messenger RNA biogenesis [BR:accx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     NDN13_11005 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_22 S1CSD-TOTE-2 OB_RNB AAA_25 AAA
Other DBs
NCBI-ProteinID: USA52024
LinkDB
Position
2294831..2296099
AA seq 422 aa
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTSRVVDLIAPIGKGQRSIIVAPP
KAGKTMLLQTIAQSIVRNNPEVFLIVLLIDERPEEVTEMERTVRGEVIASTFDEAPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLSIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMSEENLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRKA
ST
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaacttaactgaactcaagaaaaaacccattggcgaactcattaaaattgcggagttt
atgggccttgaaggcatggcacgtaaccgtaaacaagatattatttttgccattttaaaa
cgccatgccatgaacggcgaagaaatctttggtgatggtgttctcgaaattctttctgat
ggttttggcttcctacgctctgcggctggttcatatttagcagggccagatgacatctat
gtcagcccatcgcaaatccgccgttttaacttacgtacgggtgataccattactggtact
attcgcccgccaaaagaaggtgaacgttattttgctttattaaaagtaaaccaaattaac
tacgatacgcctgaaaactcgcgtaataaaattttatttgaaaacctgaccccattattc
ccgactgaacaactggtcatggaactcggtaatggtacaactgaagatttaacctctcgt
gtagtcgatctgattgcgccgattggtaaaggtcaacgttctattattgttgcaccaccg
aaagcgggtaaaacaatgttattgcaaaccattgcacaatccattgttcgtaataaccct
gaagtgttcctgattgtgctgttaattgacgaacgtcctgaagaagttaccgaaatggag
cgtactgttcgtggtgaagtgattgcatctacattcgatgaagcaccagcccgccacgtt
caagttgctgaaatggtgattgaaaaagcaaaacgtctggttgaacacaagaaggatgtt
gtcattctacttgactcgattacccgtcttgcacgtgcctataacaccgtcattccttca
tcaggtaaggtattaacaggtggtgtggatgcacatgccttagaacgtccaaagcgtttc
ttcggtgctgcacgtaacattgaagaaggtggttcactcagcattatctcaactgccttg
attgaaacaggcagtaagatggatgatgtgatctacgaagaatttaaaggtacaggtaac
caagagattacccttgaccgtcgtatcgcagagaaacgtgtattccctgcaatgaacatc
aagaaatctggtacgcgccgtgaagaacgcctcatgagtgaagaaaatctacgtaaagtc
tggattttacgtaaacttcttcacccaatggatgaacttgctgcgatggagttcttattg
gatcgtatgaaagaaacaaagaccaatgatgacttcttcgaccaaatgaaacgcaaagct
tccacttaa

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