KEGG   Acinetobacter sp. C26M: NDN11_03205
Entry
NDN11_03205       CDS       T11915                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
accz  Acinetobacter sp. C26M
Pathway
accz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:accz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NDN11_03205 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:accz03021]
    NDN11_03205 (rho)
   03019 Messenger RNA biogenesis [BR:accz03019]
    NDN11_03205 (rho)
Transcription machinery [BR:accz03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     NDN11_03205 (rho)
Messenger RNA biogenesis [BR:accz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     NDN11_03205 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_22 S1CSD-TOTE-2 OB_RNB AAA_25 AAA
Other DBs
NCBI-ProteinID: USA47156
LinkDB
Position
complement(682847..684115)
AA seq 422 aa
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTSRVVDLIAPIGKGQRSIIVAPP
KAGKTMLLQTIAQSIVRNNPEVFLIVLLIDERPEEVTEMERTVRGEVIASTFDEAPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMSEENLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRKA
ST
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaacttaactgaactcaagaaaaaacccattggcgaactcattaaaattgcggagttt
atgggccttgaaggcatggcacgtaaccgtaaacaagatattatttttgccattttaaaa
cgccatgccatgaatggcgaagaaatctttggtgatggcgttctcgaaattctttctgat
ggttttggctttttacgctctgcagctggttcatatttagctgggccagatgacatctat
gtcagcccatcacagattcgtcgtttcaacctccgtacaggcgataccataacaggtacc
attcgtccgccaaaagaaggtgaacgttattttgctttattaaaagtaaaccaaattaac
tacgatacgcccgaaaattcacgtaataaaattctctttgaaaacctcactccattattc
cctactgagcaattggttatggaacttggtaacggtacaacagaagatttaacctcccgt
gttgtcgacctgattgcaccaatcggtaaaggtcaacgctctattattgttgcaccaccg
aaagcgggtaaaacaatgttattacaaaccattgctcagtcaattgtgcgtaataaccca
gaagtattcctaattgtgcttctcattgacgaacgtcctgaagaagtaacagaaatggaa
cgcacagtccgtggtgaagtgattgcatctacatttgatgaagcaccagcccgtcacgtt
caagttgctgaaatggtaattgaaaaagcgaaacgtctagttgaacacaaaaaagatgtg
gtgattctacttgactcaattacccgtcttgcacgtgcttacaacacggtaattccatca
tcaggtaaagtattaactggtggtgtagatgctcatgctttagaacgtcctaaacgcttc
tttggtgctgcacgtaatatcgaagaaggtggttcacttaccattatttcaactgccttg
attgaaacaggcagtaaaatggatgatgtcatctacgaagaatttaaaggtactggtaac
caagagattacccttgatcgtcgtattgctgagaaacgtgtattccctgcaatgaatatc
aagaaatcaggtactcgccgtgaagaacgcctcatgagcgaagaaaatcttcgtaaggtt
tggattctacgtaaattattacatccaatggatgaacttgcagcgatggaattcttattg
gatcgcatgaaagaaaccaaaaccaatgatgacttcttcgatcaaatgaaaagaaaggca
tcaacttaa

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