Acinetobacter oleivorans: AOLE_02280
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Entry
AOLE_02280 CDS
T01263
Name
(GenBank) exoribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
acd
Acinetobacter oleivorans
Pathway
acd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOLE_02280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acd03019
]
AOLE_02280
03016 Transfer RNA biogenesis [BR:
acd03016
]
AOLE_02280
Enzymes [BR:
acd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AOLE_02280
Messenger RNA biogenesis [BR:
acd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AOLE_02280
Transfer RNA biogenesis [BR:
acd03016
]
Prokaryotic type
tRNA degradation factors
AOLE_02280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
ADI89357
UniProt:
A0AAN0UBT7
LinkDB
All DBs
Position
complement(479028..481442)
Genome browser
AA seq
804 aa
AA seq
DB search
MTKNWADPEAKAEAERYDNPIPSRTLILDTLEQLQTPQSHAELVDHFNIHDQKSIEALSH
RLSAMVRDGQIMKDGFKFQLVADQPTYEATVYINSKGLGTAHIDGQTDLLLPERELRLVF
NGDRVRVRQTSVDRKGKPWGFITEVLQHRVKQLIGKLSVHEGEYFIQPNNPNQHQPIPLE
KELVKHAGANVGDMLRVAIDSYPTREEFSTAHIIQSMADKADTEIIIPQTILEFGLPYEF
PDQVLKEAESFKEPSAQDREGRIDLRDLALVTIDGEDARDFDDAVYAEKRPGGGYRVVVA
IADVSHYVRLDSALNEEAEERGTSVYFPHFVLPMLPEALSNGLCSLNPHVDRLCMVCDLK
LSRSGRVTGYDFYPSVMHSKARLTYTQVAQYFEGATDAIPKDRDVHKSLNTLFQLYQILK
NLRADRHAMEFETIETYMTFDELGGIKEILPRTRNEAHKLIEECMLLANVAAAEYALEHD
VPMLYRVHEAPEFSRIQKVKDFVKLLGLPFPDQPTQADYQKVIEATKDRIDAPSIHAVLL
RSMMQAYYGAKNAGHYGLAYEAYTHFTSPIRRYPDLLLHRAIKAHLKQKPYPLSGAALDD
AGEHFSQTERRADEASRSVTTWLKCHYMQQHLGDEFIGIVSAVTEFGLFITLKDLYVDGM
IHISQLGDDFFIYDQASQNLVGQNRGQVFGLGDEVKIQVAGVNLEERKIDFQLLQQVTHA
GRVVRSRAPRTTKTSSQATEEVFSKPTSSDGERPVHKKKEKAKASSYTKKSGKKPSAKAE
SKPEKVKKKSKPKKKKANAKSKAE
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaactgggctgaccctgaagcgaaagctgaagctgaacgttatgacaatcct
attccaagccgtactctgattttagatacgttggaacagttgcaaacaccacaatctcat
gcagagcttgtcgatcattttaatattcatgaccaaaaaagtatcgaagcattaagtcat
cgtttaagtgctatggttcgtgatggtcaaatcatgaaagacggttttaaatttcagttg
gtggcagatcaaccaacatatgaagcaactgtttatattaatagtaaaggtttaggtaca
gcacatattgatggtcaaactgatcttttacttcctgaacgtgaactacgtttagtattt
aatggtgaccgagttagagtgcgccagacttcagtagaccgtaaaggtaaaccttggggt
tttatcacagaagttttacagcatcgtgttaaacaattaattggtaaattgtcagttcat
gagggtgaatattttattcaacccaacaatcctaatcagcatcagcctattcctttagaa
aaagaactcgtaaaacatgctggggcgaatgttggcgatatgctacgtgttgcaattgat
agctatccaacccgtgaagagttttcaacagcacatattattcagtctatggcagacaaa
gctgatacagaaattatcattccacaaaccattcttgagtttggtttgccatatgaattt
ccagatcaggtattaaaagaagcagaaagttttaaagaaccatctgctcaagaccgtgaa
ggtcgtattgatttaagagatttggcattagttacaattgatggtgaagacgctcgagat
tttgacgatgcagtttatgcagaaaaacgtccgggtggtggttaccgcgttgtcgtcgca
attgccgatgttagccattatgtacgcttagactcagccctcaacgaagaagcagaagaa
cgaggcacttcggtatatttcccacacttcgtattaccaatgctaccagaggctttgtca
aacggcttgtgttctctgaaccctcatgtagaccgcttatgtatggtctgtgaccttaag
ctctctcgttcaggccgtgtaactggttacgatttttatccgtcggttatgcactcaaag
gcacgtttgacctatacacaggtagcgcaatactttgaaggtgcaacagatgcgattcca
aaagatcgtgatgttcataaatctttgaatacacttttccagctttatcaaattttgaaa
aacttgcgtgccgaccgccatgcaatggaatttgaaaccattgaaacgtacatgactttt
gatgagctgggcgggattaaagaaattttgccacgtacacgtaatgaagcacataagctc
attgaagaatgtatgttgcttgctaacgttgctgcagctgaatatgcattagaacatgat
gttccaatgttatatcgtgtgcatgaagctccagagttttcacgtattcagaaagtaaaa
gactttgtgaaattgcttggtctacccttccctgaccaaccaactcaagcagactatcaa
aaagttattgaagcgaccaaagaccgtattgatgcaccaagtattcatgccgttttatta
cgctcaatgatgcaagcttattatggcgcaaaaaatgcgggacactatggtttggcttat
gaagcttatacccatttcacttcgccaatccgtcgttacccagatttattgttacaccgt
gctattaaggcacacttgaaacaaaagccttatcctctctctggtgctgcgctagatgat
gctggtgaacatttttctcaaactgaacgccgtgcagatgaagcttctcgtagcgtaaca
acttggttgaagtgtcactatatgcaacagcatttgggtgacgagtttattggtatcgta
agtgcagtaaccgaatttggtttattcattacacttaaagatctatatgtcgatggcatg
atccatattagccaactgggcgatgacttctttatttatgaccaagcgagccaaaatctg
gtaggtcaaaatcgtggtcaagtctttggtttaggcgatgaagttaaaattcaggtggct
ggcgtaaatcttgaagaacgtaaaattgacttccagcttcttcaacaagtcacacatgct
ggaagagtcgttcgtagccgagctccacgcacaactaaaacatcttcacaggcaactgaa
gaagttttcagtaaaccaacaagtagcgatggcgaaagacctgttcacaaaaagaaagaa
aaagccaaggcgagttcttatactaaaaagtctggtaaaaaaccttctgcaaaagccgaa
agtaaaccagaaaaagtaaagaaaaagtctaagcctaaaaagaaaaaggccaatgcaaaa
tcaaaggctgaataa
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