Acidothermus cellulolyticus: Acel_0633
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Entry
Acel_0633 CDS
T00426
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ace
Acidothermus cellulolyticus
Pathway
ace03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ace00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Acel_0633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ace03021
]
Acel_0633
03019 Messenger RNA biogenesis [BR:
ace03019
]
Acel_0633
Transcription machinery [BR:
ace03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Acel_0633
Messenger RNA biogenesis [BR:
ace03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Acel_0633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABK52406
UniProt:
A0LSJ6
LinkDB
All DBs
Position
686216..688246
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AA seq
676 aa
AA seq
DB search
MTDISTAMPTVSGENSSPSGTSDESRGGARRRKAAESGTSSLSAMVLSELQALAASLGIT
GIARMRKGELIEAIRQRQGGSGAAAGGSPAGSDAGGESPGETPAARTTVSRSRGRRAVVP
ALQTTPTLDVEVPVQSTAAAPAGSPLEISPGTAETAQPPAARAGDGQMQRRAGRFGGRNA
TGAAGGGAGASPSQPAGFGPANGAAAVSAPTAGPGLGREAAQRGAPAGNGSRVAGGQAGS
PAETGGNGNGTVSNGAERRREDEEFADMGGRRRRGRFRERGGRLRVRERSDYEPAVSEDD
VLVPIAGILDVLDNYAFVRTSGYLPGPNDVYVSLAQVRRYGLRKGDAITGMVRQPREGER
REKFNPLVRLDTVNGMDPESARNRVEFSKLTPLYPQERLRLETEPQQITTRIIDLIAPIG
KGQRGLIVSPPKAGKTMVLQAIANAITRNNPECHLIVVLVDERPEEVTDMQRSVKGEVIS
STFDRPAEDHTMVAELSIERAKRLVELGHDVVILLDSITRLGRAYNTAAPASGRILSGGV
DSAALYPPKKFFGAARNIENGGSLTIIATALVETGSRGDEVIFEEFKGTGNMELKLDRKF
ADKRIFPAVDINASGTRKEEILLSPEELQIVWRLRRVLHALDPQQALEVLIEKMRQTRSN
AEFLVQVQKTMPMPSE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacatcagcaccgcaatgcccaccgtttccggcgagaattcctctccttccggc
accagcgacgagagccgtggtggtgcgcgccgccgcaaggctgccgagagcggcacatcg
tcgctgtccgccatggtgctttcggaattgcaggcgctggccgccagtctgggaattacc
gggattgcgcggatgcgtaagggcgaattgatcgaagcaattcgccagcggcagggtggt
tcgggcgccgccgctggaggctccccggccgggagtgatgccggcggcgaaagccccggc
gagacgcccgcggcgcggacgacggtaagccgctcacgcgggcggcgggcggtggttccc
gccctgcagacgacacccacgctcgacgtcgaggttcccgtgcagtcgacggctgcagct
ccggctggttcgccgctcgaaatctctccgggtacggcggagaccgctcagccaccggcc
gcccgcgccggcgacggtcagatgcagcgtcgcgccggccggttcggcggccgcaacgcc
acgggtgcagcgggcggaggagccggcgcgagcccgagtcagccggctggtttcgggccg
gcgaacggggccgcggcggtctcagccccgacggcagggccgggcctgggtcgggaggca
gcgcagcgcggcgctccggcgggcaacgggagccgcgtggccggcggtcaggcgggcagc
ccggcggaaaccggcggcaacggcaatggaaccgtgagcaacggtgcggaacgtcgccgg
gaggacgaggaattcgccgacatgggcggccgtcgccggcgcggccgcttccgcgaacgc
ggcggacggctgcgggtgcgggaacggtcggattacgagccggctgtttccgaggacgac
gtcctggtgccgatcgccggaattcttgacgtgctggacaattacgcattcgtgcgtacg
tccggatacctgcccgggccgaatgatgtgtacgtctcgttggcccaggtgcgccggtat
ggcttgcgcaagggcgatgcgatcaccggaatggttcgccagccgcgcgaaggggaacgg
cgggagaaattcaacccgctggtgcggctggacaccgtgaacggcatggatccggagagc
gcccgaaaccgagtggaattcagcaagctcactccgctgtatccgcaagagcggttgcgg
ttggagacggagcctcagcagatcaccacgcgcatcatcgacctcatcgcaccgatcggc
aaaggccagcgcggtctcatcgtctcgccgcccaaggcgggcaagacgatggtgctccaa
gcaatcgcgaacgccattacgcggaacaatccggagtgccacctcatcgtcgtgctcgtc
gacgagcggccggaggaagtcaccgacatgcaacgctcggtgaagggcgaggttatttcg
tcgacgttcgaccgtccggcggaagaccacacgatggtcgcggagctgtccattgagcgg
gcgaagcgacttgtcgagctcggtcacgacgtcgtcatcctgctcgactccatcacccgc
ttgggccgcgcgtacaacaccgcggcgccggcgtccgggcgtattctctccggtggggtc
gactccgctgcgctgtatccgccgaagaaattcttcggcgcggcccgcaacattgagaac
ggcggttcgctcactatcattgccacggcgttggtcgaaaccggttcccgcggcgacgag
gtcatcttcgaagaattcaagggaaccggcaacatggagctcaagctcgaccggaaattc
gctgacaagcgcattttcccggcggtcgacatcaacgcgtccggcacccggaaagaagaa
atcctgctctccccggaggaactccagatcgtctggcggttgcggcgggtgcttcatgcc
ctcgacccccagcaagcccttgaggtgctcatcgagaaaatgcggcagacccgcagcaac
gcggagttcctcgtccaggtgcagaagacgatgccgatgccctcggagtga
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