Acetobacter vaccinii: FLP30_00490
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Entry
FLP30_00490 CDS
T07989
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
acek
Acetobacter vaccinii
Pathway
acek03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acek00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FLP30_00490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acek03021
]
FLP30_00490
03400 DNA repair and recombination proteins [BR:
acek03400
]
FLP30_00490
Enzymes [BR:
acek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FLP30_00490
Transcription machinery [BR:
acek03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FLP30_00490
DNA repair and recombination proteins [BR:
acek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FLP30_00490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QEO16414
UniProt:
A0A5C1YJK4
LinkDB
All DBs
Position
complement(121446..122465)
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AA seq
339 aa
AA seq
DB search
MVLQKNWQSLIKPEKLEVESGVEPARIATVVAEPLERGFGMTLGNALRRVLLSSLQGAAV
TAVQIDGVLHEFSSVAGVREDVTDIVLNIKQLALRMHGEGPKRMVLTATGPGEVRASQIQ
TGHDIEIMNPDLVICTLDDGVRLGMEFIVNTGKGYVPALANRPEDAPIGLIPIDAIYAPV
KRVSYKVEPTRVGQVTDYDKLLLTVETNGAVTPEDAVALAARILQDQLQLFINFDEPRPV
QADEPEDDLPFNRNLLRKVDELELSVRSANCLKNDNIIYIGDLVQKSEQEMLRTPNFGRK
SLNEIKEVLTSMGLSLGMNVPAWPPENIEELAKRLDEPF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttggtccttcagaaaaactggcaatcgctgatcaagccggaaaagcttgaggtcgagtca
ggtgtcgagccagcgcgcatcgcaaccgtggtggccgagcctcttgagcgtggctttggc
atgacgctggggaatgcgctgcggcgggtgctgctgtcttccctccagggtgctgctgtc
acggcggttcagattgacggcgtcctgcatgagttttcgtctgttgctggcgtgcgggaa
gatgtcactgacattgtcctgaacatcaagcagctggcactgcgcatgcatggcgaaggg
ccaaagcgtatggtgctgacggcaaccggccccggtgaggtccgcgccagtcagatccag
accgggcacgatatcgagatcatgaatcctgatcttgttatctgcacactggatgacggc
gtacgcctgggcatggaattcattgtcaatacgggcaagggctacgtgcctgctctggcc
aaccggccggaagatgcccccattggcctgattccgattgacgccatctacgctccggtc
aagcgcgtgtcctacaaggtcgagccgacccgtgttggccaggtgaccgactatgacaag
ctgctgctgacggtcgagaccaacggcgctgtaaccccggaagatgcagtggctctggcc
gcccgcatcctgcaggaccagctccagctgttcatcaactttgatgagccgcgtccggtc
caggctgatgagccggaagatgacctgccgttcaaccgcaatctgctgcgtaaggtggat
gagcttgaattgtctgttcgtagtgcaaactgcctgaagaacgacaatatcatctacatc
ggggatctggttcagaagagtgagcaggaaatgctgcgcacgccgaactttggccgtaag
tcccttaatgagatcaaggaagtcctgacctccatgggtctgtccttgggtatgaatgtc
ccggcttggccgccggaaaatattgaagagttggccaagcggcttgatgagccgttctga
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