| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
acek Acetobacter vaccinii
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:acek00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FLP30_00635 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:acek03021]
FLP30_00635 (rpoC)
03400 DNA repair and recombination proteins [BR:acek03400]
FLP30_00635 (rpoC)
Enzymes [BR:acek01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FLP30_00635 (rpoC)
Transcription machinery [BR:acek03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FLP30_00635 (rpoC)
DNA repair and recombination proteins [BR:acek03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FLP30_00635 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(137656..141831)
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| AA seq |
1391 aa
MNELMKILGQTGQAMTFDQIKIQLASPEQIRSWSYGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKFRGIICEKCGVEVTLAKVRRERMGHIQLASPVAHIWFLKSL
PSRIGLMVDLTLKDLEKVLYFESYLVLEPGTSPLKQYSLLTEEQYLDAMDEYGDEGVEVG
IGAEAIKKVLERIDCDAEKVELRQELKETTSEARRKKLVKRLKLIEAFAESGCRPEWMIL
DMVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML
QEAVDALFDNGRRGRAITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYAKLEKYGHATTIKAAKRMVEKERPEVWDILEEVIREH
PVLLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLETPEFKVTPDKSEYDAQTGALLRE
GATAFGSINEVEYALSAGGLKLHDKIRARFEHVAADGSRVFETTVTTPGRVLIAQILPKH
QAVPFSLINRQLTKKAVSDVIDTVYRHCGQKEAVIFCDRLMALGFRHAAKAGISFGKDDM
IIPAEKKELVDRTATEVKEFEQQYQDGLITAGERYNKVVDAWSRCTDEVQAAMTKEISRQ
EIGKPINSVWMMSHSGARGSPAQMKQLAGMRGLMAKPSGEIIEQPIIANFKEGLSVLDYF
TSTHGARKGLADTALKTANSGYLTRRLVDVAQDSIIIEEDCGSERGLTVRAVMDGGEVVA
SLSERILGRTAATDIVDPATGTVLVARNSLIEEADAERIEKSGVETVHIRSVLTCDSRVG
VCGSCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSMIEAS
RDGKVVIRNRNVVQNSQNVLIVMARNCEILLTDENGVEKVRYRVPYGARLLAVDGTTVAR
GQKLAEWDPYTLPIITEKAGKVEYLDLIDSITLVERMDEVTGLTAKVVVDYKQAGKGVDL
RPRLQLKDANGEVVKLDNGSDARYFLSPETLLSVENGSEVNAGDVLARLPREGSKTRDIT
GGLPRVAELFEARRPKDHAIIAEMEGRVEFGKDYKSKRRIVVKNDESGEEQEYLIPKGKH
ISVQEGDFVEKGDPLVDGPRVPHDILKVMGVEALSDYLINEIQDVYRLQGVKINDKHIEV
IVRQMLQKVEILEPGDTTYLIGETVDRIEFEVENTKCLNAGERPALAMPVLQGITKASLQ
TQSFISAASFQETTRVLTEAATAGKVDRLMGLKENVIVGRLIPAGTGSVMKRLRAIAADQ
DRQRVGRSAAE |
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| NT seq |
4176 nt +upstreamnt +downstreamnt
atgaatgaactcatgaaaattcttggccagactggccaggcgatgaccttcgaccagatc
aagatccagcttgcatcgcccgagcagatccgttcctggtcttatggtgaaatcaagaag
cccgagaccatcaactaccgtacgttcaagccggagcgtgacgggctgttctgcgcgcgc
atttttggcccgatcaaggactacgaatgtctgtgcggcaaatacaagcggatgaagttc
cgcggtattatctgcgaaaaatgcggcgttgaagtcacgctggccaaggtccgccgtgag
cgcatgggccatatccagcttgccagcccggttgcccatatctggttcctgaagtcgctg
ccaagccgtatcggcctgatggtcgatctgacgctcaaggatctggaaaaggttctctac
ttcgaaagctatctggttctcgagcccggcacgtcgccgctgaagcagtattccctgctg
accgaggaacagtatctcgacgccatggacgaatatggtgacgaaggtgttgaagtcggg
attggcgcggaagccatcaagaaggttctggagcgcattgattgcgacgccgaaaaggtg
gaactgcgccaggaactgaaggaaaccacgtccgaagcccgccgcaagaagctcgtcaag
cgcctgaagctgattgaagcgtttgcagaaagcggctgccgcccggaatggatgattctg
gacatggtgccggtcattccgccggaactgcgtccgctggtgccgctggacggtggccgt
tttgctacgtccgacctgaacgacctttaccgtcgtgttatcaaccgtaacaaccgtctg
aagcggctgatcgaactgcgtgcgcccgatattatcgtgcgtaacgaaaagcgcatgctg
caggaagccgttgacgcattgttcgacaacggtcgccgcggtcgtgccattacgggtgcc
aacaagcgtccgctgaagtccctgtccgacatgctcaagggcaagcagggtcgcttccgt
cagaacctgcttggtaagcgcgttgactattccggccgttctgtgatcgtcgtcgggcct
gagctgaaactgcaccagtgcggcctgcccaagaagatggcgctggaactgttcaagccc
ttcatctacgccaagttggaaaaatacggccacgccaccaccattaaagctgccaagcgg
atggtggaaaaggaacgtcccgaagtgtgggatatcctcgaagaggttatccgcgagcat
ccggttctgctgaaccgcgctcctacactgcaccgtctgggtattcaggcctttgaaccc
gtgctggttgaaggcaaggccattcagcttcacccgctcgtctgcaccgccttcaacgcg
gacttcgacggtgaccagatggccgtgcacgtgccgctgagccttgaggcccagcttgaa
gcacgcgtgctgatgatgtcgaccaacaacatcctcagccctgcaaacggcaagccgatt
attgtgccgtctcaggatatcgtgctcgggctgtattacctcagcctcgaaacgcctgag
ttcaaggtcacgccggacaagagcgaatacgatgcccagaccggcgcgctgctgcgcgaa
ggggcgacggcattcggttcgatcaacgaagtcgaatacgcgctcagcgctggtggcctg
aagctgcatgacaaaatccgtgcccgcttcgagcatgttgcagctgatggctcacgtgtg
ttcgaaaccacggtgaccacgcccggccgcgttctgattgctcagattcttcccaagcat
caggctgtgccgttctcgctcattaaccgccagctgactaaaaaagctgtgtcggacgtg
atcgacacggtctaccgccactgcggtcagaaagaagcggtcattttctgtgaccgtctg
atggctctgggtttccgccacgcggccaaggcaggcatttccttcggcaaggatgacatg
atcatcccggcagaaaagaaggaactggttgatcgcaccgcgaccgaggtaaaggaattc
gaacagcagtatcaggatggtctgatcacggctggtgaacgctacaacaaggtggttgat
gcctggtcgcgctgcacggacgaagtccaggccgcgatgaccaaggaaatttcccgtcag
gaaattggcaagcccatcaactccgtgtggatgatgagccactctggggcccgtgggtcg
ccggcacagatgaagcagcttgccggtatgcgcggtcttatggccaagccgtcgggtgaa
attattgagcagccgattatcgccaactttaaagaaggcctgtcggttctcgactacttc
acctccacccacggtgcgcgtaaggggctggcggataccgcgctgaagacagcgaactcc
ggttatctgacacgccgtctggtggacgtggcgcaggacagcatcatcatcgaagaagac
tgcggtagcgaacgcggtctgacagttcgcgccgtcatggatggtggtgaggttgttgcg
tctctgtccgagcggattctgggccgtacggcggccacggacattgtcgatccggcaacg
ggtacagtgctggtggcgcgtaactccctcattgaggaagcagacgccgaacgcattgag
aagtcgggcgttgaaaccgttcacatccgttcggttctgacctgcgatagccgggttggt
gtctgcgggagctgctacgggcgtgacctggcgcgcggcaccccggtcaacattggtgag
gctgtgggcgttattgctgctcagtccattggtgagccgggcacacagctgaccatgcgt
accttccatatcggtggtgcggcccagcgtggtgccgagcagtcgatgatcgaagcctcg
cgcgatggcaaggtggttatccgcaaccgcaacgttgtgcagaacagccagaacgtcctg
atcgtcatggcccgtaactgcgaaattctgctgacagacgaaaacggtgtcgagaaggtg
cgttaccgtgtgccttacggtgcccgcttgctggcagtggatggcacaactgtcgcccgt
ggccagaagctggctgagtgggatccctacaccctgccgatcatcaccgagaaggccggt
aaggttgagtatcttgacctcatcgactccatcacgctcgtcgagcgtatggacgaggtg
acaggcctgactgccaaggtggtggtggactataagcaggcaggcaagggtgttgacctg
cggccgcgcttgcagctcaaggatgccaatggcgaggtcgtcaagctcgataacgggtct
gacgcacgttacttcctgtcgcctgaaaccctgctttcagttgaaaacgggtccgaggtt
aacgcgggtgacgtgcttgcccgtctgccgcgtgaaggctccaagacgcgtgacattacc
ggcggtctgccacgtgtggctgaactgtttgaagcacggcggcccaaggaccatgccatc
attgccgagatggaaggtcgggttgagttcggtaaggactacaagtccaagcgccgtatt
gtcgtgaagaacgatgagagcggagaagagcaggaatatctgatccccaagggcaagcat
atttctgttcaggaaggggactttgtcgaaaagggcgatcccctggtcgacggtccgcgc
gtgccgcatgacattctgaaggtgatgggggttgaggcactgtccgactacctcatcaac
gaaattcaggatgtgtatcgtctgcagggcgtgaaaatcaacgacaagcacattgaggtg
attgtccggcagatgctccagaaggtcgaaattctggagcctggcgatacaacctacctg
attggcgaaaccgttgatcgcattgagttcgaggttgaaaataccaagtgcctgaatgcg
ggtgaacgccccgccctggccatgccggtgctacagggtatcaccaaggcttcgctgcag
acgcagtccttcatctctgcggcctctttccaggagaccacacgtgtgctgactgaggcc
gcaacagcgggcaaggtggacaggctcatggggctgaaggagaacgtgattgtcggccgt
ctgatccccgcagggacaggcagcgtgatgaagcgcctgcgtgccattgcggcggaccag
gaccgtcagcgtgttggacgttctgccgccgagtaa |
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