Acetobacter vaccinii: FLP30_02370
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Entry
FLP30_02370 CDS
T07989
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
acek
Acetobacter vaccinii
Pathway
acek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FLP30_02370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acek03021
]
FLP30_02370
03019 Messenger RNA biogenesis [BR:
acek03019
]
FLP30_02370
Transcription machinery [BR:
acek03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FLP30_02370
Messenger RNA biogenesis [BR:
acek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FLP30_02370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
OB_RNB
AAA_22
ATPase_2
Fungal_virus_P2_C
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
QEO16740
UniProt:
A0A5C1YN80
LinkDB
All DBs
Position
537949..539247
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AA seq
432 aa
AA seq
DB search
MHLAELKAKSPADLLACAEDLNIENASSLRKQDMMFAILKTLADNDQAIYGEGTLEIMHD
GFGYLRSPESNYLPGPDDIYISPTQVRRFGLRTGDTVEGQIRAPRDGERYFSLLKINTIN
FESPDAVRHRINFDNLTPLYPERRLQMEVESQATAPEPKAEKGKKGAQKDFTPRVIDLVS
PIGMGQRALIVAPPRSGKTVMLQSIASSIAANHPEVFLIVLLIDERPEEVTDMARSVRGE
VVASTFDEPAHRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLT
GGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELVLD
RKLADKRTFPAIDITKSGTRKEELLVDRATLSKMWVLRRILAPMGTMDAMDFLLDKLKYS
KTNNDFFEAMNN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttgcggaactcaaggccaagtctccagccgaccttctggcctgcgctgaagac
ctgaatatcgaaaacgcctcatccctgcgcaagcaggacatgatgttcgccatcctcaag
accctggccgacaacgaccaggcgatttatggcgaaggcacgcttgagatcatgcacgac
gggttcggatatctccgctcgcccgaatcgaattacctgcccggcccggacgacatctat
atttcccccacccaggtgcggcgctttggcctgcgcacaggtgatacggtggaaggccag
attcgcgccccgcgtgatggcgaacgctatttctcgctgctcaagatcaacacgatcaat
tttgagtcgcccgatgccgtgcgccaccgcatcaacttcgacaatctgacgccgctgtac
cccgagcgccgcctccagatggaagtggaaagccaggccacagccccagaacccaaggct
gaaaaaggcaagaagggcgcacagaaggactttaccccgcgggttatcgaccttgtgtcc
cccatcggcatgggccagcgcgctttgattgtggcaccgccccgctcgggtaagacggtg
atgctgcaaagcattgcgtcctccattgctgcaaaccaccccgaagtcttcctgatcgtt
ctgctgattgacgaacggccggaagaagtgaccgacatggcccgctccgtacgcggcgag
gttgtggcctcgacctttgacgagcccgcacaccggcatgtgcaggtgacggaaatggtg
ctggaaaaagctaaacgccttgttgaacacaagcgcgatgtggtgatcctgctcgactcc
atcactcgtctggcccgcgcctacaacactgtcgtgccctcatcgggcaaggtgctgaca
ggtggtgtggatgccaacgccctgcagcgccccaagcgcttcttcggtgcggcacgtaat
attgaggaaggcggctcgctgaccattatcgccaccgcgctgatcgacaccggcagccgc
atggacgaagtgatctttgaagagttcaaaggcaccggcaactccgaactggtgctggac
cgcaagctggccgacaagcgtaccttcccagccatcgacatcaccaagagcggcacccgt
aaggaagaactcctggttgaccgtgccaccctgtccaaaatgtgggtgctgcggcgtatc
ctggccccgatgggcaccatggacgccatggacttcctgctggacaagctgaaatacagc
aaaaccaacaatgacttctttgaagccatgaacaactga
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