Acetobacter vaccinii: FLP30_06050
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Entry
FLP30_06050 CDS
T07989
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
acek
Acetobacter vaccinii
Pathway
acek03410
Base excision repair
acek03430
Mismatch repair
acek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FLP30_06050 (recJ)
03430 Mismatch repair
FLP30_06050 (recJ)
03440 Homologous recombination
FLP30_06050 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acek03400
]
FLP30_06050 (recJ)
DNA repair and recombination proteins [BR:
acek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FLP30_06050 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FLP30_06050 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FLP30_06050 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
CDC45
Motif
Other DBs
NCBI-ProteinID:
QEO17340
UniProt:
A0A5C1YPZ8
LinkDB
All DBs
Position
complement(1364251..1366083)
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AA seq
610 aa
AA seq
DB search
MPTATRPTAPHDAGPQLPAVLGVEHSVSGRRWAWRGNAEDPATERMAGALAQQLGLPHTV
GRLLALRGITPEQAAHYLEPRLQSLLPDPSCLTDMDKAAARIATAVQQGETIGVFGDYDV
DGACASAILAAVLEELGCRVLTHIPDRMTEGYGPNQPALQALVAQGASLLICVDCGTASA
DVLNPLAGQADIIVLDHHKSEDALPAIHATVNPNRPDCPSGLGSICAAALAFLAMVATRR
SLRDAGWFTPDRPPPDLMRQLDLVALATVCDVMPLHGLNRAFVAQGLKVMARRDRTGLAA
LMEIASVTKAPDAFSCGFALGPRINAGGRIAEAALGLNLLRCTDRTVARQMAERLDAVNR
RRQDVEATILDLAMEQAAAQKEAGRGVILLAGRDWHPGVVGIVAGRIKERFNRPALVGAE
QEDGSIKGSGRSVPGLDLGTVIIAARQAGMLKTGGGHAMAAGFSLEAERLEEFHSFLDTR
LPQATDLPDTVDLLLDAVVSVSGASAELAQQMGAMAPFGAGNPEPMVALSHATIIRTDRI
GRDGNTLRVLLRADNGARLKALLFRAEDSPLTPVLEDSTRPPLHLAGYLRAESWNGRMDA
TFFIQDIARA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcccacagccacccgcccgacagccccgcatgacgcggggccacagctccctgccgta
ctgggggtcgaacacagtgtcagcgggcggcgctgggcctggcggggcaatgccgaagac
ccggcaacagagcgcatggcaggcgctctggcccagcagcttggcctgccccatacggta
ggccgcctgctggccctgcgcggcataacacccgaacaggctgcccactatctggagcca
aggctgcaaagcctgctgcccgacccgtcctgcctgactgacatggacaaggcggctgcc
cgcattgccacagccgtgcaacagggcgaaaccataggtgtttttggggactacgacgta
gacggtgcctgcgccagcgccattctggccgctgtgctggaggaactgggctgccgggtt
ctcacccatattcccgaccggatgaccgagggctacggccccaaccagcctgcgctgcaa
gcccttgtggcgcagggggcatccctgctcatctgtgtggactgcggcacggcctcggcc
gatgtgctcaacccgctggcggggcaggccgatatcatcgtgcttgaccaccataagtcg
gaagatgcgctgcccgccatccatgccacggtcaaccccaaccggccggactgcccgtcg
ggactggggtccatctgcgctgcggcactggcgtttctggccatggtggccacccggcgc
agcctgcgcgatgcaggctggtttacccctgaccgccccccgccagacctgatgcgccag
ttggacctggtggcgctggcaacggtgtgtgatgtcatgcccctgcacgggcttaaccgt
gcgtttgtggcccagggcctcaaggtcatggcccggcgtgaccgcacgggccttgcggcg
ctgatggaaattgccagcgtgaccaaagcgcccgatgcgttttcctgcgggtttgcgctg
gggccacgcattaacgcaggagggcggattgccgaggccgccctgggcctgaacctgctg
cgctgcaccgaccgcaccgttgcccggcagatggccgagcggctggatgcggtcaaccgc
cgcagacaggacgtggaagccactattctggacctcgccatggagcaggccgccgcccag
aaagaggctggccggggcgttatcctgctggccgggcgcgactggcaccccggtgtggtc
gggattgtggcagggcggatcaaggagcgcttcaaccgcccggctctggtcggggcggag
caggaggacggctccatcaaaggctcaggccggtctgtgccggggctggaccttggcacc
gtgattattgccgcacgccaggccggtatgctcaaaaccggtggtgggcacgccatggcg
gccgggttctcgctggaggccgagcggctggaggagttccactccttcctcgacacccgc
ctgccacaggcaacagacctgcccgacacagtggacctgctgctggatgcggtcgtgagc
gtatcgggcgccagtgccgagctggcgcagcagatgggggctatggccccgtttggtgcg
ggcaaccccgaacccatggtggccctgtcccacgcgactattatacggacagacaggatc
gggcgtgacggcaataccctgcgggtgctgctacgggccgataacggcgcacggctgaag
gccctgctgttccgcgcggaagacagccccctgaccccagtgctggaggacagcacgcgc
ccgcccctgcaccttgcgggctacctgcgggcggaaagctggaatggccgcatggatgcg
acctttttcattcaggacattgcccgcgcctga
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