Acetobacter vaccinii: FLP30_07950
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Entry
FLP30_07950 CDS
T07989
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
acek
Acetobacter vaccinii
Pathway
acek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FLP30_07950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acek03019
]
FLP30_07950
03009 Ribosome biogenesis [BR:
acek03009
]
FLP30_07950
Enzymes [BR:
acek01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
FLP30_07950
Messenger RNA biogenesis [BR:
acek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FLP30_07950
Ribosome biogenesis [BR:
acek03009
]
Prokaryotic type
rRNA processing factors
FLP30_07950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
RhlB
S1
Motif
Other DBs
NCBI-ProteinID:
QEO17665
UniProt:
A0A5C1YQ25
LinkDB
All DBs
Position
complement(1760650..1763556)
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AA seq
968 aa
AA seq
DB search
MAGHASCLSRCMPLYRRRKRPCSVPCRPGSRTAQAGHRRTGVFLFMSKRMLIDATHAEET
RVVVMDGNRLEDYDVESAAKKQLKGNIYLARVIRVEPSLQAAFVEYGGNRHGFLAFSEIH
PDYYQIPVADREKLLALQAEEEALIDGSSDEEDDDRSEDTAAAAPSDDDAQPDASAPEQD
GDAAAAQATPDYVGGETDTGEEALIQKRIARFLRNYRIQEVIRRRQVLLVQVVKEERGNK
GAALTTYISLAGRYCVLMPNALRGGGVSRKITSVPDRRRLRDIVSSLNLPRGMAMIVRTA
GAQRPGPEITRDCEYLLHLWDDIRDHTLNSIAPALIYEEASLVKRAIRDVYTREVSEIVV
DGESGWKAARDFMRMLMPQHAEKVRLWQKDNQPLFTHYRVEGHLDAMFSPTVQLRSGGYL
VINQTEALVAIDVNSGKATSQRNIEETAFRTNQEAADEVARQLRLRDLAGLIVIDFIDME
SRRHNAMIERRLKDALRHDRARIQIGSISHFGLLEMSRQRLRPSVAEAAFITCPHCNGTG
MARSVESSALHVLREVEEEGARRRASAITVHVAADIAFYILNNKRDWLGQIEQRHHMEVL
FAADSTLSPPDVRIEQRQAARVIPQQLPPVENVIVADDTNLTVEQDSAPVAEQDEAVATA
PTTNADEDEPRRRRRRRRRRGGNGNNAAAQTADTTAEPQDDSSAPVEEQDEQPEATGNLV
PGRRRTRHSRVRRSDADSVEQTVEIAEGPAPQRPVWNGPTPANPFSHEHDIFELLERGVQ
QHNNAPAEAQEKKAPSAPQREETKPTTEADATHEAPAEEDNVVAADVVEVEEAPKPRRRT
TRRKAPAAKSANEAETEAAQAEDAPAEATDEAEPAKPTRRRAAPRRKAATTAPQAEDTAA
ETVEDAEPAKPTRRRTTRKAAKPAAEDKTIAANVAEDVKSEAAEPVVQPIVIEDSPPVAR
RRTGWWAR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccatgcgtcctgcctgtcccgatgtatgcctctttatcgccgccggaagcgc
ccctgctccgtgccctgccgccccggcagccgcaccgcgcaggctggccaccggcgtacc
ggagtttttctttttatgtcaaagcggatgcttatcgacgcgacacacgcggaagaaacg
cgcgtggtcgtgatggatggaaacagacttgaagattacgatgttgagtcggctgccaaa
aagcagctgaaagggaacatctatctcgcccgcgtcatccgggtcgaaccgagccttcag
gctgcttttgttgaatatggcggcaaccggcacgggttccttgctttcagcgaaattcac
cccgactactaccagatcccggttgccgaccgtgagaagctactggcccttcaggcggaa
gaggaagccctgatcgacggctcctctgacgaggaagacgacgaccgcagcgaagacact
gcagcagcagccccgtctgacgatgacgcacagcccgatgccagtgctccggaacaggat
ggtgacgccgcagccgcacaggcaacgcccgattatgttggcggtgagaccgatacgggt
gaagaagcgctgatccagaagcgcattgcccgtttcctgcgtaactaccggattcaggaa
gtcatccgccgccgtcaggtgctgctggtgcaggtagtcaaggaagaacgcggcaacaaa
ggcgctgcgctgaccacctatatctcgctggcggggcgttactgcgtgcttatgcccaac
gccctgcggggtggcggggtatcacgcaagattacctccgttcccgaccgtcgccgcctg
cgcgacattgtctccagcctcaacctgccgcgcggcatggccatgattgtccgcacagcg
ggcgcacagcggccggggccagaaatcacgcgcgattgcgaatatctgctccatctgtgg
gacgacatccgcgaccatacgctcaactccatcgctcctgccctcatttatgaagaagct
agcctggtcaagcgtgccatccgcgatgtgtacacccgcgaagtcagcgaaattgtcgtt
gacggtgaaagtggctggaaagccgctcgggacttcatgcgtatgctcatgccccagcac
gccgaaaaggtgcgcctgtggcagaaagacaaccagccgctgttcacgcactaccgcgtg
gaagggcatctggacgccatgttctccccaacggtgcagttgcgctctggtgggtatctg
gtcatcaaccagaccgaagctctggtcgcgattgacgttaactcaggcaaggccacaagc
cagcgtaatattgaggaaacggccttccgcaccaatcaggaagctgcggacgaagttgcg
cgccagctccgtctgcgtgatctggctggcctgattgtcatcgacttcatcgacatggag
tcccgccgccacaatgcgatgatcgaacgccgcctgaaggatgcgctgcgccacgaccgc
gcccgtatccagattggctctatctcgcactttggcctgctggaaatgtcccgccagcgg
ctgcgtccctcggtcgcggaagccgcctttatcacctgcccgcactgcaacggcaccggc
atggcccgcagtgtggaaagctccgccctgcatgtcctgcgcgaagtggaagaggaaggc
gcacgccgtcgcgcatccgccattacggtccatgtggcagcggatattgcgttctacatc
ctcaacaacaagcgcgactggctgggccagatcgagcagcgccaccatatggaagtgctg
tttgctgcggactccaccctttcgccgcccgatgtccgtatcgaacagcgtcaggctgca
cgggttatcccgcagcagttgccgcccgtagagaacgtgatcgtcgcggacgacaccaac
ctgactgtcgagcaggacagcgcccctgttgcagaacaggatgaggccgttgccactgcc
cccaccaccaacgctgatgaggacgaaccgcgccgccgtcgccgtcgccgtcgccgtcgg
ggtggcaatgggaacaacgccgctgcccagactgccgacaccacggccgagcctcaggac
gactcttccgctccggtggaagagcaggatgagcagcccgaagccacaggcaaccttgtt
cccggccgccgcaggacacgccactcccgcgtgcgccgttcggatgcggacagcgttgag
cagacggttgaaattgctgaagggcctgccccgcagcgcccggtgtggaatggccccacc
cctgcgaatccgttcagccacgagcacgatattttcgagcttctggaacgcggcgtgcag
cagcataacaacgccccggctgaagcgcaggaaaaaaaggctccttccgcaccccagcgt
gaggaaaccaagcccaccaccgaagcagatgctacgcatgaggcccctgctgaagaggac
aacgtggtagccgccgacgttgtggaggtggaggaagcccccaagccccgccgcaggacc
acacgccgcaaggcccctgctgcaaaatctgccaacgaggctgaaactgaggctgctcag
gccgaagacgcacctgcagaggccacagacgaggcagaaccggccaagccgacacgccgc
cgcgctgcccctcgccgcaaggctgccactacagccccacaggccgaggacacagccgca
gagacggtggaagacgcggaaccggccaagccgacacgccgccgcacaacccgcaaggct
gccaagccagccgctgaagataaaaccattgccgccaacgtggcagaggatgtcaaaagc
gaagcggctgaaccggttgtccagcctatcgtgattgaggacagcccccctgtcgcacgc
cgccgcaccggctggtgggcgcgctag
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