Anaerocolumna cellulosilytica: acsn021_05590
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Entry
acsn021_05590 CDS
T06764
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acel
Anaerocolumna cellulosilytica
Pathway
acel03030
DNA replication
acel03430
Mismatch repair
acel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
acsn021_05590 (dnaE)
03430 Mismatch repair
acsn021_05590 (dnaE)
03440 Homologous recombination
acsn021_05590 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acel03032
]
acsn021_05590 (dnaE)
03400 DNA repair and recombination proteins [BR:
acel03400
]
acsn021_05590 (dnaE)
Enzymes [BR:
acel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
acsn021_05590 (dnaE)
DNA replication proteins [BR:
acel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
acsn021_05590 (dnaE)
DNA repair and recombination proteins [BR:
acel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
acsn021_05590 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
Secretin
HHH_3
Motif
Other DBs
NCBI-ProteinID:
BCJ92990
UniProt:
A0A6S6R111
LinkDB
All DBs
Position
621762..625250
Genome browser
AA seq
1162 aa
AA seq
DB search
MNFTHLHLHTEYSLLDGSGKIREMVARVKELGMDSMAITDHGVMYGVIDFYRTCLSEGIR
PIIGCEVYVAPGSRFDREANSSDDRYYHLVLLAENNTGYANLMKIVSLGFLEGFYYKPRV
DFEVLRSYSEGIIALSACLGGEVASNLRKGFYEEGKKAALNLRDIFGDNNFFLELQDHGI
PEQNTVNQGLLRMNEETGIPLVATNDVHYTLDSDATSHDILLCIQTQKKVTDENRMRYEG
GQYFIKSPKEMQSLFPYALEALNNTHKIAMRCNVEIEFGEYKLPKFDVPASFTALEYLQK
LCRDGLKERYPNPSKELLERLDYEIETIRSMGFVDYFLIVGDFIKYARDNDIMVGPGRGS
AAGSLVSYSLGITNIDPIKYNLLFERFLNPERLTMPDIDIDFCFERRQEVIDYVVEKYGK
DRVVQIVTFGTMAARAVIRDVGRVLDLGYARVDTVAKMIPTELGITIEKALKQNAELRTL
YHEDEEIKYLIDMSMRLEGLPRHTSMHAAGVVISKAPVMEYVPVSRASDESVTTQFTMTI
LEELGLLKMDFLGLRTLTVIQNAVRLINRKRNDSEILDINKIDYSDKEVYTLIASGKTEG
IFQLESAGMKSFMKELKPRGMEDIIAGISLYRPGPMDFIPKYVRGKNEAGQIQYDCPQLE
PILSPTYGCIVYQEQVMQIVRDLAGYSYGRSDLVRRAMSKKKASVMEKERHNFVYGNEEE
GVLGCMKNGISEKVANHIFDEMTDFAKYAFNKSHAAAYAVVAYQTAYLKCYYPIEFMAAL
MTSVIDNPGKVAEYIFTCRQMGIKILPPDINEGYSTFSVSEGAIRYGLSAIKGLGRPVID
AVVRERELNGRFTSLNDFAERLSGKEVNKRTVESFIKSGAFDSLSGTRKQLMMVYVQILD
DIAQNKKKNLTGQLSLFDFAGEKEAADYEINLPDVGEYTMEQKLSFEKEVLGIYVSGHPL
EAYEELMKKNITATTLDFAMDEETNEVKVKDGDTATVGGMISQKTIKTTRNNTMMAFITL
EDMVGAVEIIIFPRDYEKYKIFLSEDNKILVRGKITVEEEKAAKLICQEIIPFDHIQKEV
WIKYPDKQRFVEDEQNLYQILSDYDGEDSVCIFLECEKAIKHLPKSKSIKADIELLDKLK
KTYGEANIKVVEKSIEKARKKD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaattttactcatttacatttacatacagaatacagtttactggatggttccggtaag
attcgagaaatggtagccagagtgaaagaactcggaatggacagtatggcaataacagat
catggtgtcatgtatggagttatagacttttacagaacctgtctatcagagggaatcagg
ccgattattggttgcgaagtctacgtagcaccaggttccaggtttgaccgggaggctaat
tcgtccgacgacagatattatcatctggtgttgcttgcagaaaataatacgggatatgcc
aatctgatgaagattgtgtctttgggttttttggaaggcttttattataaaccaagagtt
gattttgaggtattaagaagttacagtgaaggaattattgccttaagtgcttgtcttggg
ggagaagtagctagtaatttaagaaaaggcttttatgaagaaggaaaaaaagctgcttta
aatctcagagatatctttggagataacaatttcttcttagaactccaagaccatggaatt
cctgaacaaaatacggtaaatcaaggcttgcttcgcatgaacgaggagacagggatacct
cttgtagctaccaatgatgttcactatactctagatagcgatgctacctcacatgacatt
ctcttatgcattcagacccaaaaaaaggtgacagatgaaaaccgtatgcgttatgagggg
gggcagtactttattaaatctccaaaagagatgcaaagtcttttcccttacgctctggag
gctcttaacaatacccataagatagccatgcgctgtaacgtagagatagaattcggagag
tataagctgcctaaatttgatgtaccggcaagctttacagcacttgaatatttgcaaaaa
ctttgccgggacgggcttaaagaaagatatcccaatccttcaaaggagttattagaacgt
ttagactatgaaatcgaaacgataagaagtatggggtttgttgattacttcctaattgtt
ggagattttataaagtacgccagagacaatgatattatggtaggacccggaaggggcagc
gctgccggcagtcttgtatcgtattcgctaggcattaccaatattgatccaattaagtat
aacctcctgtttgagcgtttcttaaaccccgaaagacttactatgccggatattgatatt
gacttctgcttcgaacgaagacaggaagtcattgattatgtagtggaaaagtacggtaaa
gaccgggtggtgcagatagtaaccttcggaacgatggctgcaagagcggttatccgtgat
gttggacgtgttttggatttaggttatgccagagtggacaccgtggccaaaatgatacct
acagaacttggaattacaatagaaaaggctttaaagcagaatgcagaattacgaactctt
tatcatgaggatgaagagattaaatatttaattgatatgtccatgcggcttgagggactt
ccccgtcacacctcaatgcatgcggcaggagttgttattagtaaagcgcctgttatggaa
tatgtaccggtgtcaagggcttctgatgaatccgttacaacccagtttacaatgaccatc
ttagaggaacttgggcttttaaaaatggacttcttaggtttaagaacacttacggttatc
caaaacgccgtacgtttaatcaatcgaaaacgaaatgacagtgagatacttgatattaat
aaaattgattattctgataaagaagtgtatacacttattgcctctggcaagacagaagga
atttttcagttagaaagtgccggtatgaaaagcttcatgaaggaactaaaaccaagagga
atggaggatattatcgcgggtatctccctatatcgtccgggtcccatggactttattcca
aagtatgtaagaggtaagaatgaagccggacagatacaatatgactgtccccagttagaa
cccatattatcgcctacctatggctgtatcgtataccaggaacaggttatgcagattgtg
cgtgatttggcaggttacagctacggaagaagcgatttggtacgccgtgccatgtctaag
aaaaaggcttctgtaatggaaaaggaacgccataactttgtatatggtaatgaagaggaa
ggcgttctaggttgtatgaaaaacggaatttctgaaaaggtagccaaccatatttttgat
gagatgacggattttgcaaagtatgcctttaataagtcccatgcagcagcttatgcagtg
gtagcttatcaaacggcatatttaaaatgttactatcccattgagtttatggcagcgtta
atgacttctgttattgataatccgggtaaggttgccgaatatatctttacctgccgtcaa
atgggaattaaaatattacctcccgatatcaatgaaggctatagcaccttctctgtttca
gagggtgcaatacggtatggattatcagctattaaaggtttgggaagaccggtaattgat
gctgtagtaagagaaagagaactcaatggcagattcactagtctgaacgattttgcagag
aggctctctggtaaagaagtaaataaacgaacggttgaaagttttataaagtccggtgct
tttgacagtctttcgggtaccagaaaacaattaatgatggtatatgtacagatactagat
gatatagcacaaaataagaagaaaaacctgaccggacaattaagtctttttgacttcgca
ggggaaaaagaggcggcggattatgaaataaatcttccggatgtaggtgaatataccatg
gagcagaagttaagctttgaaaaagaagtactaggtatctatgtaagcgggcatcccttg
gaagcttatgaagaactgatgaaaaagaacattactgcaacaactctggattttgcaatg
gatgaggaaaccaacgaggtaaaggtaaaggatggtgatacagcaacagtgggaggaatg
atttcccaaaaaaccattaagacgaccagaaacaataccatgatggcgtttattacttta
gaagacatggttggagcagtagagataatcatatttccaagagattacgaaaagtataaa
atctttctgtccgaggataataagatactggtaagaggaaaaataacggtagaagaagaa
aaggctgcaaagctgatatgtcaagaaattattccctttgatcatattcaaaaagaagtc
tggataaaatatccagacaagcaaagatttgtagaagatgaacaaaacctatatcaaatt
ttaagtgattatgacggagaagatagcgtttgtatatttttggaatgtgaaaaagcaata
aaacacctgcctaaaagcaaaagtattaaggcagatatagaactcctggataagctaaag
aaaacctatggtgaggcaaatatcaaagtggtggaaaagagtattgaaaaagccagaaaa
aaggattaa
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