Anaerocolumna cellulosilytica: acsn021_10520
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Entry
acsn021_10520 CDS
T06764
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
acel
Anaerocolumna cellulosilytica
Pathway
acel03410
Base excision repair
acel03430
Mismatch repair
acel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
acsn021_10520 (recJ)
03430 Mismatch repair
acsn021_10520 (recJ)
03440 Homologous recombination
acsn021_10520 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acel03400
]
acsn021_10520 (recJ)
DNA repair and recombination proteins [BR:
acel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
acsn021_10520 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
acsn021_10520 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
acsn021_10520 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
G3P_antiterm
Motif
Other DBs
NCBI-ProteinID:
BCJ93483
UniProt:
A0A6S6QQ65
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Position
1239241..1241070
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AA seq
609 aa
AA seq
DB search
MEKWVLKNYKEDFNSIMERHNVSEVIARLVTNRKHTGEDRIKQYLNPMLDNLHNPMDMKD
MEKAKNLLVQKLKEKKKIRIVGDYDVDGVTSTYILYQALLRCGAVVDYEIPDRIKDGYGI
NINIIQAAYDEGIDTLLTCDNGIAALDQVAKAKELGMTVIVTDHHDLPYQECSVEDGSLS
DPMVTVCDEELKIYRRHIVPPADAVVNPKRPDCSYPFKGLCGAAVAFKLIQVLYEAFGIE
KEETFSFLEIVAIATVCDVMDLVGENRVFVKHGLKQLKKTKNYGLCALMEKNNIHLLSLS
AYHLGFIIGPCLNASGRLSTAKKGLELLLATDSGKAEALAIELKKLNDLRKEMTAKGVEQ
AIEQVEIAGMSKDKVLVVYLKECHESLAGIIAGRLKERYNKPVIILTASEEGVKGSCRSI
EAYNIFEELSKCRELLTKFGGHPMAAGLSLKEENVDILRTSLNSNTILTEEDLIPKVSID
IVLPFGYLNEKLMEELEILEPFGKGNSKPVFAEKNVIIRKAAILGKNSNVLKFSLVNTYG
RSMEALYFGDVSGFQEEIIKNYGKEELDKMFQNRETSVRMSITYYPGINEYGGNRTMQVI
IQNYMLSKR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatgggtactaaagaattacaaagaagattttaattccattatggagagacat
aatgtaagtgaagtaattgccaggctagtaacaaacagaaaacataccggtgaagacaga
attaaacaatacttaaacccaatgcttgacaacttacataatcccatggatatgaaagat
atggaaaaagccaaaaatcttttggtgcagaaactaaaagaaaagaagaaaatccgcatt
gtaggagactatgatgtagatggagttacttccacttatattctataccaggctcttctt
cgctgtggtgccgttgtggattatgaaatacctgaccgtatcaaagacggttatggtatt
aatataaatattatacaagcggcctatgacgaggggattgatactctgttaacctgtgat
aatggtatagcggctttagaccaggtggcaaaagccaaggagcttggcatgacggtaatt
gtaacggatcaccatgatcttccctaccaggagtgttcagtagaagacggtagtctgtcg
gatcctatggttactgtctgtgatgaggagttaaagatttaccgaaggcatattgtgccg
cctgccgatgcagtagtcaatcccaaacggccggattgctcctatccttttaaagggtta
tgcggtgccgcagtggcatttaaactgatacaggttctctatgaagcgttcggcattgag
aaagaggagaccttttctttccttgaaattgttgctatagcgactgtgtgtgatgtaatg
gatttggttggtgagaacagggtctttgtaaaacacggactaaaacaactaaagaagacg
aaaaattacggtctttgcgcattaatggaaaagaataatatccatctcttaagtttgtcc
gcataccacctaggctttattatagggccttgtcttaatgcttccggaagacttagtaca
gccaaaaaggggctagagttgttattagccacagactctggtaaggcagaggcattagca
atcgagttaaagaaactgaatgatttgcgaaaagaaatgacagctaaaggtgtggagcag
gcaattgaacaggtagaaattgcaggtatgtctaaggataaggtattagtcgtttactta
aaagaatgccatgaaagccttgccggaatcattgctggcagattaaaggaacgatataac
aagcctgtcattatactcacagcctctgaggaaggggtaaaaggttcctgccgctccatt
gaagcttataatatctttgaagagttgtcaaaatgcagggagctcctgactaaattcgga
gggcatccaatggcggcaggactttcattaaaggaggagaatgttgatatactaagaacc
tctttaaatagtaatacgatacttaccgaagaggatttgattcctaaagtgtccattgat
attgtattgccttttggttatcttaatgagaagttaatggaagagcttgagattttagag
ccttttggtaaaggtaacagtaagcctgtatttgcagagaaaaatgtaattattagaaaa
gccgcaatccttggtaagaatagtaatgtactaaaattttcacttgttaatacatacgga
agatccatggaggcattatattttggagatgtatcgggatttcaggaagaaataattaag
aattatgggaaagaagagcttgataagatgttccaaaatcgggaaaccagtgtaagaatg
tctataacctattatcctggtattaatgaatacggcggaaatcgcacgatgcaggtcatc
attcaaaactatatgttgtcaaaaagataa
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