Anaerocolumna cellulosilytica: acsn021_18410
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Entry
acsn021_18410 CDS
T06764
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
acel
Anaerocolumna cellulosilytica
Brite
KEGG Orthology (KO) [BR:
acel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acel03400
]
acsn021_18410 (sbcC)
DNA repair and recombination proteins [BR:
acel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
acsn021_18410 (sbcC)
Archaeal homologous recombinant proteins
acsn021_18410 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
nSTAND3
AAA_21
ABC_tran
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BCJ94272
UniProt:
A0A6S6R475
LinkDB
All DBs
Position
2209324..2212464
Genome browser
AA seq
1046 aa
AA seq
DB search
MRPIYLIMNAFGPYGSKIEVNFEVLKGQGLFLITGDTGAGKTTIFDAIAFALFGEASGSI
RGADTFRSDFAEGTSKTFVEYTFEQKGKRYVINRNPRYIRPKKNGEGNTTENAEAVLTLP
NGEVITGYKEVSNQVVDLLGITSKQFKQIAMIAQGEFLQLLLADSKERGEVFRRVFNTEL
YQNVQRTLKNKELEAKKSCENSERSILQYISGIHCPPGDVGDELKEKIATATIHSALDIL
DELQKLILEDAKEEKSLKSRLEELNLRIEEQVNLILRGKSINKIFSDLTTVNQKLEELLK
DSKSMEFKETQVKAAETARHQVMFLEENAKKEKESENKIRLAIEQRKEEVERLTEEYKKV
SAEYKKQLDKEPEREQLLHVINRLQSQLPQYRMVSEQKQNISKLSEEIKLLTEKFSNLQK
QKEEHEKRKKVLKEELEGLKDTEVLLIAKQQERDNLEYREQGLKQVYAREKESVRLKEHS
MEMVNRYKELETEYTGLSADYLHKETAFFREQAGIIAKNLTEGEACPVCGSTIHPHKAVL
SHDAPSETLLISSKKEVEKKRSMLHKAGEEIAVNQKEQDKNEEVLREKWAEYLPNQVFVN
EHTKRVNSIIEAFTSCKKCKEETEAACQELSQKKERKTACLELLEASERALQDASTLEAV
VEKKRTHLVTELAAMEGAYENTKKDLEYTEEEARQKLNTWDKELACLKNALKDMEDTYHK
LGQELKTKEALLENQNTEKDELVKRKEEALKLYQEKRIACGFLTEEDYQNAKIPEDEIKS
LKESIDRYQDVLRTVRQESQRLTKETAGLNLQDIAKLEEKKVELEDEKKKINGAIEVVTT
RLGMNVSVAEHLKKAVNAVETLQKEYLLLSRLSKTANGELAGKQKIAFEQYVQTFYFKQI
LSEANKRLKIMTNNRFELFCREEGMDLRSQSGLEIDVLDHYTGKQRPVKSLSGGEAFKAS
LSMALGLSDVIQRYAGGVEMNTLFIDEGFGALDSESLEQAIQTLQSLADKNRLVGIISHV
TELKERIDRQIKIEKNSMGSIIQMQV
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccatatacttaatcatgaatgcgttcggaccttatggatcaaaaattgaggtt
aactttgaagtcttgaaaggtcaaggattgtttttaataacaggagacaccggagccggt
aaaaccacaatatttgatgccattgcttttgccttattcggagaagccagtggttctatc
agaggtgcggatacctttcgaagtgactttgcggaagggacaagcaaaacgtttgttgaa
tatacctttgaacagaaaggaaaacgatatgttattaatcggaatccgcgatatataaga
ccaaagaaaaacggtgaaggtaataccacggaaaatgcagaagctgtactgacccttcct
aacggggaagttattaccggctataaggaggttagtaaccaggtggtggatttgctgggt
attacttcaaagcaatttaaacagattgccatgattgcacagggcgaattcctgcaatta
ctccttgctgacagtaaagaaagaggagaggtctttcgcagggtctttaacacagaactg
tatcaaaatgtacagcgtacactaaagaataaggaattagaagcgaagaaaagttgcgaa
aatagtgaacggagtatattacaatatataagcggtattcattgtcctcccggtgatgtg
ggagatgagttaaaggaaaaaatagccactgcaaccattcatagtgctttagatatttta
gatgaattacagaagcttattctagaggatgcaaaagaagaaaagtcactaaaaagccgg
ttagaggaattgaatctaaggatagaggagcaggtaaacctaatccttcgcggaaagagt
ataaataagatattttcagacttaacgacagtgaatcaaaaactggaagaactgttaaag
gattctaaaagcatggaatttaaagaaacgcaggtaaaagctgcagaaactgcaagacat
caggttatgtttcttgaagaaaacgcaaaaaaagagaaagagtctgaaaataaaatacgc
cttgctatagaacaacgtaaggaggaggtagaaaggttaaccgaggaatataaaaaagtt
tctgcggaatacaaaaaacaactggataaggaaccggagcgggaacaactgttgcatgta
ataaatcggctgcaaagccaattacctcagtaccggatggtaagtgaacaaaagcaaaat
atctctaagttatcggaagaaattaagctgcttactgaaaaattctccaatctacagaaa
cagaaggaggagcatgagaaaaggaaaaaggtattaaaagaagaactggaggggcttaag
gatacagaggttttactaatagccaagcagcaggagcgggacaatttagagtacagggaa
caggggctgaaacaagtctatgcaagggaaaaagaatctgttaggttaaaagagcattct
atggagatggttaaccggtataaggaattagagacagagtataccggattaagtgcagat
tatctgcataaggaaaccgctttttttagagaacaggcaggcattatagcaaaaaacctt
acagaaggggaagcttgtccggtatgcggttcaaccattcatccccataaggcggtttta
tcccatgatgcacccagtgagactctacttatcagttcaaaaaaagaagtggagaaaaaa
cgttccatgctgcataaggcaggggaagaaatagccgtcaatcagaaagaacaggataaa
aatgaagaggttttaagggaaaaatgggcggaatatttaccaaatcaagtttttgtaaat
gagcatacaaaaagagtgaatagcattatagaagcctttactagctgtaaaaaatgcaaa
gaagaaaccgaagctgcctgtcaggaattatcacagaaaaaagagagaaaaacggcttgt
ctggaactgttagaagcctctgaaagagctttgcaggacgcaagtaccctggaggctgtt
gtagaaaaaaagcgtacccatctggttacagaattagcagctatggagggggcttatgag
aataccaaaaaagacttggaatataccgaagaagaggccagacaaaagttaaatacttgg
gataaagaacttgcttgtttaaagaacgcattaaaggatatggaggatacgtatcataaa
ctaggacaggaacttaaaacaaaagaagctttgctagagaatcaaaatacagagaaagat
gagttagttaagcggaaggaagaagcacttaagctttatcaggaaaaaaggatagcctgt
ggatttttaacggaagaggattatcagaatgctaaaataccggaagatgagataaaaagc
ttaaaagaaagtattgaccgctaccaggatgtactaaggacagtaaggcaggaaagccaa
agacttactaaggaaacagcgggattaaacttacaggatattgccaaactagaagagaag
aaagtagaattagaggatgaaaaaaagaagataaatggggctatcgaggtggttaccacc
agactgggtatgaatgtgtctgtggcagaacatcttaaaaaagcagtgaacgcggttgag
accttacagaaggaatatttattactaagcaggttgtcaaaaacagccaacggagagctt
gccggcaagcaaaaaattgcctttgaacagtatgtacaaaccttctacttcaaacaaatc
ttatcagaagccaataaaagattaaagataatgacaaacaaccgatttgagttattttgc
agagaagaagggatggatttacgttcccaatcaggtcttgaaattgatgtattggaccac
tataccggaaagcagcgccctgtaaaatccttgtcagggggagaagcttttaaagcctcc
ttaagtatggcactgggcttgtcagatgtgattcagcgctatgccggtggagtagaaatg
aatactctttttatcgatgaaggctttggtgcccttgattcagaatccttggagcaagca
atacaaacgcttcaaagccttgcagacaaaaaccgccttgtaggaattatatcccacgtc
actgaattaaaggaacgaattgaccgtcagattaagatagaaaaaaacagtatgggaagt
atcatacagatgcaggtttaa
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